Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00378 ATGGAATCTGAAGGATTCAATAATCCTCCTAAGATTCGTAGAAATGCGTCTGCCTCTGCAAATATCAGTAACCTTTCTTTGCAAAGCAATCCTACAAACTCAGCCCCTCAGAAGAACATAACCAACTGGCCTTTTGACGAAAAGCTTCTTGTACAAACTCTTTACAAGGTTCTAGTTTATGTATCAAAAACCTATCCCATTGTTCTATATTTGCGGGATGTTGACAAGTTGTTGTATAGATCACGACGGGTATATAACCTATTCCAAATAATGTTGAATAAACTACAAGGACGAATTTTGATTCTTGGATCGCGAGTTTTGAATTCTGGTAGTGACTACAAAGAAATGGATGAGAGACTTTCTTCCGTTTTCCCCTACAACATAGAACTGAACCCCCCAGAAGACGAATCTTATATTGTCAGCTGGAAGTCTCAATTTGAAGAGGACATGAAGACAATACAGACTCAGGATAATAGGAACCATATCATGGAAGTGCTTGCAGCCAATGATCTTTATTGTGATGACCTGGGTTCCATCTGTGTGGCAGATACTATGGCTTTCAGTAACAATATAGAAGAGATCGTCGTTTCAGCAATCTCTTATCATTTAATGAACAACAAAGATCCTGAATACCAAAATGGCAAACTAGTCATTCCTAGCAGCAGTTTGTCCCATGCATTGGGTATATTCCAGGAGGGGAAATTCAGCACAAGAGATACATTGAAATTAGAAGCCCAGGCAGTTACGACTGAGCCGAGAGAAGAAGGAGTTGTTGTGAAGCCAGAAACAACGTCAGAAAATCCTGCTCCTGAAATAAAGGCTGAAGCAGATATATCAACTTTAGTGGGAAAAACTGACGGTGAAAATACAGCTCCTGCACCAAAAGTTGAAGTTGCCCCTGACAATGAGTTTGAGAAGCGAATAAGGCCTGAGGTAATACCTGCAAACGAGATTGGTGTAAAATTCTCTGATGTTGGTGCCTTAGATGAGACCAAAGAATCGCTTCAAGAACTAGTAATGCTTCCTCTTCGAAGGCCAGACCTTTTCCGCGGAGGCCTTCTAAAGCCTTGTAAAGGAATACTGCTTTTTGGACCTCCTGGCACAGGGAAGACAATGCTGGCAAAGGCCATTGCAAACGAAGCTGGAGCAAGTTTCATTAATGTGTCCATGTCTACCGTCACCTCTAAATGGTTTGGTGAAGATGAGAAGAATGTTCGAGCTTTGTTCACACTAGCAGCCAAGGTCTCCCCAACTATTATATTTGTTGATGAGGTTGATAGTATGCTGGGACAACGTACCAGAGTTGGAGAGCATGAAGCCATGCGGAAAATAAAGAATGAGTTTATGACACTTTGGGATGGACTAATGACAAATCCAGGGGAGCGCATCCTTGTTCTTGCTGCCACCAATAGGCCGTTTGACCTAGATGAAGCAATAATTAGGAGATTTGAAAGGAGAATAATGGTGGGGATGCCAGGCCCGGAGAACAGGGAAAAAATTTTGAGGACTCTTTTGGGAAAAGAAAAGGTGGACGAGAAACTTGATTTTAAGGAACTCGCAACTATGACAGAAGGATACAGCGGAAGTGATCTCAAGAACTTGTGCACAACCGCTGCTTACAGACCTGTTAGAGAGTTAATCCAACAAGAGAGACTAAAAATGCTGGAGAAAAGGCAGAAAGGTGTTGAAGAACAGAATAACAATGTCCAAGAAGCTACCCAAGATGCTTTGGAAGGAAAAGAGGAAGTTCAACAGGAAAGAGTAATTTCCCTTAGACCTTTGAACATTAAAGACTTCAAAGAGGCTAGGAGTCAGGTTTCCGCAAGCTACGCAGCTGAGGGGGCTGGAATGAGTGAGTTAAAGCAGTGGAATGAAATGTACGGGGAAGGAGGTTCAAGGAAGAAAGAGCAATTATCTTACTTCCTGTGA 1929 0.4209 MESEGFNNPPKIRRNASASANISNLSLQSNPTNSAPQKNITNWPFDEKLLVQTLYKVLVYVSKTYPIVLYLRDVDKLLYRSRRVYNLFQIMLNKLQGRILILGSRVLNSGSDYKEMDERLSSVFPYNIELNPPEDESYIVSWKSQFEEDMKTIQTQDNRNHIMEVLAANDLYCDDLGSICVADTMAFSNNIEEIVVSAISYHLMNNKDPEYQNGKLVIPSSSLSHALGIFQEGKFSTRDTLKLEAQAVTTEPREEGVVVKPETTSENPAPEIKAEADISTLVGKTDGENTAPAPKVEVAPDNEFEKRIRPEVIPANEIGVKFSDVGALDETKESLQELVMLPLRRPDLFRGGLLKPCKGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTVTSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTLWDGLMTNPGERILVLAATNRPFDLDEAIIRRFERRIMVGMPGPENREKILRTLLGKEKVDEKLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQQERLKMLEKRQKGVEEQNNNVQEATQDALEGKEEVQQERVISLRPLNIKDFKEARSQVSASYAAEGAGMSELKQWNEMYGEGGSRKKEQLSYFL* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00378 642 Coils Coil 552 582 - -
Phac2g00378 642 Pfam ATPase family associated with various cellular activities (AAA) 360 490 IPR003959 GO:0005524|GO:0016887
Phac2g00378 642 Gene3D - 319 575 IPR027417 -
Phac2g00378 642 SMART AAA_5 356 493 IPR003593 GO:0016887
Phac2g00378 642 Gene3D - 492 574 - -
Phac2g00378 642 ProSitePatterns AAA-protein family signature. 463 482 IPR003960 GO:0005524|GO:0016887
Phac2g00378 642 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 320 608 IPR027417 -
Phac2g00378 642 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 319 495 - -
Phac2g00378 642 Pfam AAA+ lid domain 514 549 IPR041569 -
Phac2g00378 642 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 48 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00378 Phac-Chr2 1899951 1905216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00378 320 554 Calmodulin-binding Proteins AT3G56690 38.655 6.91e-44 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00378 - - pvu:PHAVU_002G1610001 1232.62