Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00377 ATGGGAAACTGTAACAGCGAAGCTTATTCCCAATCGCAGCCACATTCCGAGCATCACCAGCATCAACCCCAACCTTCCAACGGCATCAGCGTCCTCCCTCCCAATTCCAAGCCCACCGTGGGCCGGGTCCTGGACCGGCCCATGGAGGACGTCCGCTCCGACTACATATTCGGGCGCGAACTGGGCCGCGGGCAATTCGGCGTCACCTATTCAGTGACGCACAAGCACACTAACGAAAACTTGGCGTGCAAATCCATTGCCAAGCGCAAAGTCCACCGCGACGATTTGGATGACGTCCGTCGCGAGGTGCAGATCATGCACCACCTCACCGGCCACCGAAACATCGTCGAGCTTAAGGGAGCCTACGAGGACCGACATTCCGTCAATCTCGTCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCGACCGGATCATCGCCAAGGGCCATTACTCCGAGCGCGCCGCCGCCGACCTCTGCCGCCAGATCGCCACGGTGATTCACGACTGCCACAGCATGGGAGTGATGCACAGGGATCTGAAGCCTGAGAACTTCTTGTTCCTCGGCAAGGAGGAAAACTCGCCGCTTAAGGTCACGGACTTCGGTCTCTCCGTGTTCTTCAAGCCCGGCGATGTGTTTAAGGATCTTGTTGGGAGTGCTTATTATGTTGCTCCTGAAGTACTGCGTAGAAGTTATGGACCCGAAGCTGATATTTGGAGTGCTGGGGTTATATTGTTCATTCTGCTCTCTGGTGTCCCTCCCTTCAATGCAGGAAATGAACAGGGTATCTTTGATGCTATTCTTCTTGGACATATTAATTTTGCATCAGATCATTGGTCTTCCATTTCAAGTAGTGCCAAAGATTTGGTCAAGAACATGTTACGAGCTGATCCCAAAAAAAGGCTCTCGGCAGTTGAAGTCCTTAATCATCCTTGGCTGAAAGAAGATGGAGCATCTGATAAACCTCTAGATATAACTGTTTTAACCAGAATGAAACAATTCAGGGCAATGAACAAGCTGAAGAAAGTAGCTCTGAAGGTTATTGCTGAAAATCTTTCTGAAGAAGAAATCATTGGCTTGAAGGAAATGTTTAAATCCATGGACACAGATAATAATGGAACAATCACTTTTGAAGAGTTGAAAGCTGGACTGCCAAAACTGGGTACTAAGATTTCTGAGTCTGAAGTAAGGCAGTTAATGGAAGCGGCTGATGTAGACGGAAATGGGACCATTGATTACATTGAATTTATAACAGCTACCATGCACATGAATAGAATGGAAAGAGAGGACCACCTATATAAAGCTTTTGAATATTTTGACAAGGATCGAAGCGGGTACATCACTATGGAAGAGTTGGAATCTGCCCTTAAAAAATATAATATGGGTGATGAGAAAACAATAAAGGAAATCATTGCCGAAGTCGATACAGACAATGATGGAAGAATTAACTATGACGAGTTTGTAGCCATGATGAGAAAAGGAAATCCAGATTTAGTAACCAAACGTCGCAAATAA 1512 0.4729 MGNCNSEAYSQSQPHSEHHQHQPQPSNGISVLPPNSKPTVGRVLDRPMEDVRSDYIFGRELGRGQFGVTYSVTHKHTNENLACKSIAKRKVHRDDLDDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIIAKGHYSERAAADLCRQIATVIHDCHSMGVMHRDLKPENFLFLGKEENSPLKVTDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRSYGPEADIWSAGVILFILLSGVPPFNAGNEQGIFDAILLGHINFASDHWSSISSSAKDLVKNMLRADPKKRLSAVEVLNHPWLKEDGASDKPLDITVLTRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNNGTITFEELKAGLPKLGTKISESEVRQLMEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDKDRSGYITMEELESALKKYNMGDEKTIKEIIAEVDTDNDGRINYDEFVAMMRKGNPDLVTKRRK* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00377 503 ProSiteProfiles EF-hand calcium-binding domain profile. 426 460 IPR002048 GO:0005509
Phac2g00377 503 Gene3D - 320 494 - -
Phac2g00377 503 ProSitePatterns Protein kinases ATP-binding region signature. 61 88 IPR017441 GO:0005524
Phac2g00377 503 SMART efh_1 465 493 IPR002048 GO:0005509
Phac2g00377 503 SMART efh_1 394 422 IPR002048 GO:0005509
Phac2g00377 503 SMART efh_1 358 386 IPR002048 GO:0005509
Phac2g00377 503 SMART efh_1 430 458 IPR002048 GO:0005509
Phac2g00377 503 ProSitePatterns EF-hand calcium-binding domain. 367 379 IPR018247 -
Phac2g00377 503 SUPERFAMILY Protein kinase-like (PK-like) 39 320 IPR011009 -
Phac2g00377 503 SUPERFAMILY EF-hand 350 491 IPR011992 -
Phac2g00377 503 FunFam Calcium-dependent protein kinase 1 319 494 - -
Phac2g00377 503 CDD STKc_CAMK 54 311 - -
Phac2g00377 503 Pfam Protein kinase domain 57 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00377 503 PANTHER SERINE/THREONINE-PROTEIN KINASE 49 486 - -
Phac2g00377 503 FunFam Calcium-dependent protein kinase 1 57 139 - -
Phac2g00377 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Phac2g00377 503 Pfam EF-hand domain pair 359 419 IPR002048 GO:0005509
Phac2g00377 503 Pfam EF-hand domain pair 429 491 IPR002048 GO:0005509
Phac2g00377 503 ProSiteProfiles EF-hand calcium-binding domain profile. 461 496 IPR002048 GO:0005509
Phac2g00377 503 MobiDBLite consensus disorder prediction 1 34 - -
Phac2g00377 503 ProSitePatterns EF-hand calcium-binding domain. 474 486 IPR018247 -
Phac2g00377 503 ProSitePatterns EF-hand calcium-binding domain. 403 415 IPR018247 -
Phac2g00377 503 Gene3D Transferase(Phosphotransferase) domain 1 140 319 - -
Phac2g00377 503 ProSiteProfiles Protein kinase domain profile. 55 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00377 503 SMART serkin_6 55 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00377 503 ProSiteProfiles EF-hand calcium-binding domain profile. 390 425 IPR002048 GO:0005509
Phac2g00377 503 Gene3D Phosphorylase Kinase; domain 1 57 139 - -
Phac2g00377 503 ProSiteProfiles EF-hand calcium-binding domain profile. 354 389 IPR002048 GO:0005509
Phac2g00377 503 MobiDBLite consensus disorder prediction 1 45 - -
Phac2g00377 503 FunFam calcium-dependent protein kinase 1 140 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00377 Phac-Chr2 1890062 1896257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00377 41 503 EF-hand Containing Proteins AT4G23650 78.710 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phac2g00377 Pkinase 1.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00377 K13412 - gmx:100817321 898.271