Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00359 ATGACTACGCCACCCACCGAGTACACACACCACACCAAACTACTCACACTCTCGCACACCCAACACCACCCTCCCAAAAACCCATATCCCAGACTCGTCAGAATAACCGTCACGGACGCCGACGCCACCGACTCCTCCAGCGACGAAGAACAAACCTTCCACTCCTCCAAGCGCCTCCGACAACGGCACAGGAAATTCGTCAACGAGATTTCCATCGAGCCCTGCGCCGGTAACAACAATGGCGTCTTCTCGAGGAAGAGAGTTCGAAGCAGGAGCGTGGTGGGGAAAGGCAGAGTTGCAGAGACGCCGCGCGTGTCGACGGTTAAGAAATTCCGCGGAGTGAGACAAAGGCCGTGGGGAAAATGGGCGGCGGAGATACGCGACCCGTCGCGACGCGTGAGGCTATGGTTGGGTACCTACGACACTGCCGAGGAAGCCGCCTTAGTGTACGACAACGCGGCTATCAAGCTGCGTGGACCCGACGCGCTCACCAATTTCATAACGCCACCCTCCACGTGGCACAACGAAGACCCCACGCCGGTGTCCAACGGTTACGCCTCCGCCGAGGAAACTCGGAACAAAACCCTGTTTTCTCCCACTTCCGTTCTCCACTCTTGTTCTTTGTCCGAGGAAGCTGAATCCATAGCCGGCAAAGACGATGACTACTCCTGCGTGTCCGAGAGTTGCAAGGCCAAAGCTGAGTCACTGTTTCCGATTCCGAGCGAACTGAAATTTGAGTTCCAGGACTGTTTGGCGGCGCCGGAGATGTTCGGCGAGTTGGACAGCGCCGCCGCGCCTGAGAGCGTATTGTTCTCCGACGACGATTGGCCTGGTGTGTTTCTCACTGCTTGTGAGGATTTGGGTTTGAAAAGTTGGCATACCGACAGAAATCACGAGTTTTTCCAAGATATCGACGATTTATTTCTCTCCGATCCTCTTCTTGCTCTCTGA 951 0.5584 MTTPPTEYTHHTKLLTLSHTQHHPPKNPYPRLVRITVTDADATDSSSDEEQTFHSSKRLRQRHRKFVNEISIEPCAGNNNGVFSRKRVRSRSVVGKGRVAETPRVSTVKKFRGVRQRPWGKWAAEIRDPSRRVRLWLGTYDTAEEAALVYDNAAIKLRGPDALTNFITPPSTWHNEDPTPVSNGYASAEETRNKTLFSPTSVLHSCSLSEEAESIAGKDDDYSCVSESCKAKAESLFPIPSELKFEFQDCLAAPEMFGELDSAAAPESVLFSDDDWPGVFLTACEDLGLKSWHTDRNHEFFQDIDDLFLSDPLLAL* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00359 316 CDD AP2 109 166 IPR001471 GO:0003700|GO:0006355
Phac2g00359 316 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 30 228 - -
Phac2g00359 316 Pfam AP2 domain 110 159 IPR001471 GO:0003700|GO:0006355
Phac2g00359 316 SUPERFAMILY DNA-binding domain 110 166 IPR016177 GO:0003677
Phac2g00359 316 FunFam Ethylene-responsive transcription factor 2 109 168 - -
Phac2g00359 316 Gene3D AP2/ERF domain 109 168 IPR036955 GO:0003700|GO:0006355
Phac2g00359 316 PRINTS Ethylene responsive element binding protein signature 111 122 IPR001471 GO:0003700|GO:0006355
Phac2g00359 316 PRINTS Ethylene responsive element binding protein signature 133 149 IPR001471 GO:0003700|GO:0006355
Phac2g00359 316 ProSiteProfiles AP2/ERF domain profile. 110 167 IPR001471 GO:0003700|GO:0006355
Phac2g00359 316 SMART rav1_2 110 173 IPR001471 GO:0003700|GO:0006355
Phac2g00359 316 MobiDBLite consensus disorder prediction 40 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00359 Phac-Chr2 1796014 1798114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00359 1 211 AP2-EREBP Transcription Factor Family AT4G27950 46.222 2.21e-50 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac2g00359 AP2 2.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00359 - - vra:106777252 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04455 2 42538457 42540107 Phac2g00359 2 1796014 1798114 PCT