Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00348 ATGGAGAGTGGAAAAAGTTGTGAGCAGAAAGCACTGGTGGGTGAGCTAATTCAGGGGTTGGAGTTGGCAACAAAGTTGAATGAATACTTGAATATACCCTCTTTGGTTGAGACTAGGGACTCACTACTGCAGAGGATATTGTCTTCTTTTGACAAGGCTTTCCTTATTCTAACACAGAATGCACCAATTTCAATGTCAGAAGAAGCCATGCATCAACTAACTCAAAGTCTTGATCATGAGGACTATGAAGGTGCCCACAAGGATGATCAAGAACTAAATCAAAATGGAAAGAAAAGAAAGTGGATGTCTAAATGGACGGAACAGGTTAGCGTGAAGATCCAAGATGGGATTGAAGAGCCTCTCCACGATGGTTACAGTTGGAGAAAATACGGACAGAAAAACATCCAAAGTGCAAAACATCCTAGTTACCGAGGAAGCCACATCTGTTCTAAGGGAAACGGTGTCGTTCCATCACCAAAATCAGCAGACATGGAAGAAGAACCGCAAGATTGTGATAGTAACGTTCAGTTTCATTTTGCAGAGTCATCGCAAGAAAGACTCACAAACTACACAAACACGTTGTCTGCAGAAACGGATAACATAACGCCACATCTATTCCCTTCTTTTGAATGCATGACACAAGATAACAACCACCACACCTTTTTTCCTTCCTTGGAACCAGAGAATGATCCTTTTTTCAGCACCATTGCTCAAACATCCTTGTTATCTCCGAACACACCTCAATCAAGTTACTTTGTGTCTCCCTCTTTCACCCTACATGATGAATTCGACAGGGTCTTTGACAAGCCGTGCTCTGATTCTGATGCTGCTGGAATCGTTCTAGCTGAAGCATCAACCACCAATTCTCCAATTTTTGACTTTAATTTCTCACTCGATGCACTGGGCATTGGTGCAATTTTTCCCTTCCATCGTAAGTGCACTTGA 945 0.4222 MESGKSCEQKALVGELIQGLELATKLNEYLNIPSLVETRDSLLQRILSSFDKAFLILTQNAPISMSEEAMHQLTQSLDHEDYEGAHKDDQELNQNGKKRKWMSKWTEQVSVKIQDGIEEPLHDGYSWRKYGQKNIQSAKHPSYRGSHICSKGNGVVPSPKSADMEEEPQDCDSNVQFHFAESSQERLTNYTNTLSAETDNITPHLFPSFECMTQDNNHHTFFPSLEPENDPFFSTIAQTSLLSPNTPQSSYFVSPSFTLHDEFDRVFDKPCSDSDAAGIVLAEASTTNSPIFDFNFSLDALGIGAIFPFHRKCT* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00348 314 SMART WRKY_cls 121 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g00348 314 MobiDBLite consensus disorder prediction 141 168 - -
Phac2g00348 314 ProSiteProfiles WRKY domain profile. 116 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g00348 314 Gene3D WRKY domain 108 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g00348 314 SUPERFAMILY WRKY DNA-binding domain 120 149 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g00348 314 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 141 IPR044810 GO:0003700
Phac2g00348 314 Pfam WRKY DNA -binding domain 122 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00348 Phac-Chr2 1730631 1732575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00348 6 201 WRKY Transcription Factor Family AT4G23810 25.379 1.52e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac2g00348 WRKY 1.8e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00348 - - vun:114174666 357.066