Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00347 ATGTCCACCACCGCAACCACAACAACATCAGAAGAAGTTAGCAGCAAGGAGTGGAAAGTGATACACATGACCGAGCAAGAGGAGGATCTCATTCACAGGATGTACAAGCTAGTCGGAGACAAGTGGAATTTGATAGCGGGTCGGATTCCGGGTCGGAAAGCTGAAGAGATAGAGAGATTCTGGATTATGAGACACACTCATGCTTTTTCTGTTACAACAAATCAAAGTAAAGCCAAACACTCTTGA 246 0.4472 MSTTATTTTSEEVSSKEWKVIHMTEQEEDLIHRMYKLVGDKWNLIAGRIPGRKAEEIERFWIMRHTHAFSVTTNQSKAKHS* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00347 81 SMART sant 19 67 IPR001005 -
Phac2g00347 81 SUPERFAMILY Homeodomain-like 24 62 IPR009057 -
Phac2g00347 81 CDD SANT 23 61 IPR001005 -
Phac2g00347 81 Gene3D - 23 81 - -
Phac2g00347 81 FunFam MYB-like transcription factor 22 64 - -
Phac2g00347 81 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 18 65 - -
Phac2g00347 81 Pfam Myb-like DNA-binding domain 24 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00347 Phac-Chr2 1721529 1724807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00347 23 61 MYB Transcription Factor Family AT5G52600 56.410 1.99e-12 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac2g00347 Myb_DNA-binding 2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00347 K09422 - gmx:100814431 125.561