Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00345 ATGGACGGAATGCAAGAAAGAAACTCAGAGCTTGGAACCGATATTGGTTCTTCCTTATCGAACCTGATATTAACAGGTGGTTCAAACGCCCTTGACTCAATCTTCTCGAATTGCTGCCCCCCAACAAACGCCAGCAGTAGCAACTCTGTGTTGGATCATTTAGAGCCATTTGGGTGTTCCGGGTTTGAGCCTTTGGGCTCTTCCGTCTACCTTCGCCAGAGGGACATCCTGCAAAAGTTCTACCAAGAAAACAGAGGGAATGGGTCTTTTCTTCCCACTTCCTTGGCAAATCCTTCTATGAACTCTGTTTACACTAGTTCGTTGACTTCTTCTTTGACCAACCCTTGCAAGAAAAAGCTCTACAGGGGAGTGAGACAGAGACACTGGGGCAAATGGGTCGCGGAAATTAGACTGCCCCAGAACAGGATGAGAGTGTGGTTGGGCACCTACGAAACCGCCGAAGCCGCCGCCTATGCCTACGACCGCGCCGCCTATAAGCTACGTGGAGAGTACGCGCGCTTGAATTTCCCCAATTTGAAGGACCCCACCAAGCTGGGGTTCGGAGATTCCGCCAGATTGAACGCCTTGAAGAGCTCCGTCGACGCCAAAATCCAAGCCATATGCCAAAAGGTGAAAAGGGAGAGAGCCAAAAAGATCGCCGCCAAGAAGCTCAGTTCGGCCACCGCTCACGCCAACCGCAAGCAGAGCGAGAAGATCAATTCTTCCGCCTCCTCCTCCTCCTCCTCGCTGCCGCTGTCGCCGTCGTCGATTTTTTGCGATAATTGGGCGAACGAGTTGTTTTCGCCCAGCGTTTCGGAGGACGGGATTTGGAAGGGGGAGAACTCGCCGGCGTCGGTTTCCATGGAATGTCCAACGATGGTAACGGACGACACAGAGTTCGAAGGTTGTTCCCTGGCGAGGTTGCCTTCTTTCGATCCCGAGTTGATTTGGGAAGTTCTTGCCATTTGA 969 0.5232 MDGMQERNSELGTDIGSSLSNLILTGGSNALDSIFSNCCPPTNASSSNSVLDHLEPFGCSGFEPLGSSVYLRQRDILQKFYQENRGNGSFLPTSLANPSMNSVYTSSLTSSLTNPCKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLKDPTKLGFGDSARLNALKSSVDAKIQAICQKVKRERAKKIAAKKLSSATAHANRKQSEKINSSASSSSSSLPLSPSSIFCDNWANELFSPSVSEDGIWKGENSPASVSMECPTMVTDDTEFEGCSLARLPSFDPELIWEVLAI* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00345 322 MobiDBLite consensus disorder prediction 222 253 - -
Phac2g00345 322 PRINTS Ethylene responsive element binding protein signature 121 132 IPR001471 GO:0003700|GO:0006355
Phac2g00345 322 PRINTS Ethylene responsive element binding protein signature 143 159 IPR001471 GO:0003700|GO:0006355
Phac2g00345 322 CDD AP2 119 179 IPR001471 GO:0003700|GO:0006355
Phac2g00345 322 Gene3D AP2/ERF domain 120 178 IPR036955 GO:0003700|GO:0006355
Phac2g00345 322 ProSiteProfiles AP2/ERF domain profile. 120 177 IPR001471 GO:0003700|GO:0006355
Phac2g00345 322 SMART rav1_2 120 183 IPR001471 GO:0003700|GO:0006355
Phac2g00345 322 MobiDBLite consensus disorder prediction 228 253 - -
Phac2g00345 322 SUPERFAMILY DNA-binding domain 120 177 IPR016177 GO:0003677
Phac2g00345 322 FunFam Ethylene-responsive transcription factor 2 119 178 - -
Phac2g00345 322 Pfam AP2 domain 121 170 IPR001471 GO:0003700|GO:0006355
Phac2g00345 322 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 37 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00345 Phac-Chr2 1706830 1708598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00345 2 321 AP2-EREBP Transcription Factor Family AT1G64380 46.779 4.59e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac2g00345 AP2 4.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00345 - - gmx:100785364 428.328