Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00306 ATGAGCAAGACTTCACCTTTGAATGCAACAAGTTCAAGCAGGGACAACAAGTTCAAGGGTGTTCGCCGCCGCAAATGGGGCAAGTGGGTGTCGGAGATTCGTGTTCCGGGGACGCAAGAGCGTCTCTGGCTGGGAACCTACGCCACGCCGGAGGCGGCGGCGGTGGCTCACGACGTCGCCGTGTACTGTCTGAGGAGGCCTTCTTCGTTGGACAAGCTTAACTTACCCGAGACCTTGTGTTCTTACAGTGGTCAGCTGAGGGAGATGTCTCCGAGGTCTGTTCAGAAGGTGGCTTCGGATGTTGGAATGGATGTTGACGCCAGAAACATTTCTGAGGGAAGAGTTTCATCTGGGGTGGCACAAAGTGAGAAGAAAATGGAGGTTGCTGTTAGAGCAGGTGGTGATGATTCTGATGAGTTTTGGTGGGATGGTTTGGAGGGTGATGATTCTGGGACTTGGAAAGGAAGTGGTGAAGATTGTACAGAAAGAGATACCTTGAACGTTTCCATTGAAGATTATCTTTAG 525 0.5124 MSKTSPLNATSSSRDNKFKGVRRRKWGKWVSEIRVPGTQERLWLGTYATPEAAAVAHDVAVYCLRRPSSLDKLNLPETLCSYSGQLREMSPRSVQKVASDVGMDVDARNISEGRVSSGVAQSEKKMEVAVRAGGDDSDEFWWDGLEGDDSGTWKGSGEDCTERDTLNVSIEDYL* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00306 174 CDD AP2 17 51 IPR001471 GO:0003700|GO:0006355
Phac2g00306 174 ProSiteProfiles AP2/ERF domain profile. 17 76 IPR001471 GO:0003700|GO:0006355
Phac2g00306 174 SUPERFAMILY DNA-binding domain 17 69 IPR016177 GO:0003677
Phac2g00306 174 Gene3D AP2/ERF domain 16 77 IPR036955 GO:0003700|GO:0006355
Phac2g00306 174 SMART rav1_2 17 82 IPR001471 GO:0003700|GO:0006355
Phac2g00306 174 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Phac2g00306 174 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Phac2g00306 174 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 10 121 - -
Phac2g00306 174 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00306 Phac-Chr2 1465650 1466174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00306 10 107 AP2-EREBP Transcription Factor Family AT1G71520 61.000 3.92e-39 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac2g00306 AP2 1.9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00306 - - gmx:100816257 236.113