Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00285 ATGGAACAAGAAGAACCAACAGGCACCATGCAACAATGTGGAATGGCCCCAACAACGTCAAAAACGACAACATCGTATCGTGGTGTTCGACAGCGAAAATGGGGCAAATGGGTGTCGGAGATTCGTGAGCCGGGGAAGAAAAGCAGAATATGGTTAGGGAGCTATGAGTCACCGGAGATGGCGGCGGCGGCATATGACGTGGCGGCGTTGCACCTCAGAGGACGCGCCGCCAAACTCAATTTTCCTGAACTGGCGGAGACACTGCCACGTCCCGCCAGCTCCAAATCCGAGGATGTACAGGTGGCAGCACAACAAGCTGCATTGAGGTTCACTAGGTCAGCAACAATGTCACATAATCAAATATGTATCAGTGAAACTAGTAACAGTAACAGTAATAACAGTAGTGGTGTGGTTCCTCTGCAAGTGGGACTTTCAGCTACCCAAATTCAAGCTATAAATGAGTCTCCATTGGAGTCACCAAAGATGTGGATGATGCAAATGGCAGAGACACCTAGGTTTGGGTTTGGTGATGAGTACTCCATGATGATGGTGTCTTGTGATGGTGATGATGGTTATGGCATGGAGTTGAGTGGATGGGAAGAAATGCATCATGAATCCTTATGGGACTCTCCTGAATATATGTGA 645 0.4822 MEQEEPTGTMQQCGMAPTTSKTTTSYRGVRQRKWGKWVSEIREPGKKSRIWLGSYESPEMAAAAYDVAALHLRGRAAKLNFPELAETLPRPASSKSEDVQVAAQQAALRFTRSATMSHNQICISETSNSNSNNSSGVVPLQVGLSATQIQAINESPLESPKMWMMQMAETPRFGFGDEYSMMMVSCDGDDGYGMELSGWEEMHHESLWDSPEYM* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00285 214 CDD AP2 26 84 IPR001471 GO:0003700|GO:0006355
Phac2g00285 214 ProSiteProfiles AP2/ERF domain profile. 25 82 IPR001471 GO:0003700|GO:0006355
Phac2g00285 214 FunFam Ethylene-responsive transcription factor 2 24 83 - -
Phac2g00285 214 SMART rav1_2 25 88 IPR001471 GO:0003700|GO:0006355
Phac2g00285 214 MobiDBLite consensus disorder prediction 1 27 - -
Phac2g00285 214 SUPERFAMILY DNA-binding domain 25 83 IPR016177 GO:0003677
Phac2g00285 214 PRINTS Ethylene responsive element binding protein signature 64 84 IPR001471 GO:0003700|GO:0006355
Phac2g00285 214 PRINTS Ethylene responsive element binding protein signature 26 37 IPR001471 GO:0003700|GO:0006355
Phac2g00285 214 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 19 167 - -
Phac2g00285 214 Gene3D AP2/ERF domain 25 83 IPR036955 GO:0003700|GO:0006355
Phac2g00285 214 Pfam AP2 domain 25 74 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00285 Phac-Chr2 1399580 1400407 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00285 24 209 AP2-EREBP Transcription Factor Family AT1G71450 49.462 1.28e-53 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac2g00285 AP2 4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00285 - - pvu:PHAVU_002G036000g 401.364