Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00199 ATGAGAAGAGGAAGCAGTGATGAAAGTGGTTTGAAGAAGGGGCCATGGAGTCCAGAAGAGGATGAAAGACTAGTGGATTACATTCAGAAGCATGGCCATGGAAGCTGGAGAGCTCTTCCAAAGCTTGCAGGGTTGAACAGGTGTGGAAAGAGTTGCAGACTCAGGTGGACTAACTACCTCAGACCTGATATCAAAAGAGGCAAATTCTCTGAAGAAGAAGAGAAACTCATTATCAATTTGCATGCAGTTCTTGGGAATAAGTGGGCAGCTATAGCATCTCATCTACCAGGAAGAACAGATAATGAAATTAAGAATCTGTGGAACACACATTTGAGGAAAAAGCTTTTGAAAATGGGGTTAGATCCAATGACTCACCGTCCAAGAACTGATCACCTAAACCTTCTCACCAATCTCCACCACATTTTGGCAGCTGCAAAAATTGTGAGCAGTTTCACAAACCCTTCTGACATAAACAATGCTCTAAGGCTACACTCTAATCTAGCCAAATTCCAATCATTGCAACAAAACATGTTTCAACTCACTCCTGCATCAAACTCTGATCCACTCAACCCTTTTGCACCATTAAACTCACTGCAAGATGGTTTTGTGAATGATGTTTTGGGGTTGAATCATCACTCTAATCTCCAAAACCTTTATCATGATGATGATTCACTTCTTCAAATGCACCCCAATTTCCAAAACTTTGAGGCCCTTCAGCAGCCAACACAAGATGGTTCCTTAAATGCTGACCCTTCACCATCAAATTCTCTTCCAAATCTGGTTTCTGCCTCCCCTGAAAGTTCCCCAGTGAAGGAAGCAGAAAAGGTTAATGCAAACTCAAAGGATTGTTCCAACCCTTGTTCCACCACCTTTGAGTTAACATGGGGAGATTTCATGGATGAAGATGCAACAGAAACTTATTGGAAAGGTTTCATAGACCAACATTCTAACCAGACATGGTCAACAGTCCCATGA 975 0.4195 MRRGSSDESGLKKGPWSPEEDERLVDYIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSEEEEKLIINLHAVLGNKWAAIASHLPGRTDNEIKNLWNTHLRKKLLKMGLDPMTHRPRTDHLNLLTNLHHILAAAKIVSSFTNPSDINNALRLHSNLAKFQSLQQNMFQLTPASNSDPLNPFAPLNSLQDGFVNDVLGLNHHSNLQNLYHDDDSLLQMHPNFQNFEALQQPTQDGSLNADPSPSNSLPNLVSASPESSPVKEAEKVNANSKDCSNPCSTTFELTWGDFMDEDATETYWKGFIDQHSNQTWSTVP* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00199 324 FunFam Transcription factor MYB39 68 129 - -
Phac2g00199 324 MobiDBLite consensus disorder prediction 242 283 - -
Phac2g00199 324 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Phac2g00199 324 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Phac2g00199 324 FunFam MYB-related transcription factor 12 65 - -
Phac2g00199 324 SMART sant 12 62 IPR001005 -
Phac2g00199 324 SMART sant 65 113 IPR001005 -
Phac2g00199 324 CDD SANT 68 111 IPR001005 -
Phac2g00199 324 MobiDBLite consensus disorder prediction 242 266 - -
Phac2g00199 324 Gene3D - 68 115 - -
Phac2g00199 324 CDD SANT 15 60 IPR001005 -
Phac2g00199 324 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Phac2g00199 324 Gene3D - 12 65 - -
Phac2g00199 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Phac2g00199 324 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Phac2g00199 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Phac2g00199 324 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 239 - -
Phac2g00199 324 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00199 Phac-Chr2 1047536 1050055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00199 2 313 MYB Transcription Factor Family AT5G16770 48.214 5.63e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac2g00199 Myb_DNA-binding 3.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00199 K09422 - gmx:102660452 438.728