Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00183 ATGACTCAGAACACTGATATGAGAATTGAATCGGGAACTTGCAATGTGTGTTCTGCTCCTTGTTCATCTTGCATGCATCTCAATCATGCTCTCATGGGGTCAAAGGCTGAAGAGTTTTCTGATGAAAACTGTCGCATAGGAGCGGCTATTGATCAGTACTCTATGGATGAGGACAATGCATACTCTCTCAGGAGCAGAGCTTGTGAAAGCTCACAACACACTGTCAGTGAAGCAAGTAATATGCAGAGTGTTAATTCAAGTCATGACGCACTGTCTGAAAATGCCAAGAGTAGACAGATCATTCCGAATAAGTATCAGGATTCCAAGCATTTAGAAGGTCATGATGACAACACTTCTTGTATTAGTAGAGCCAGTGATACTAATTCAGTGAATGTTAGCCATCAAAGGAATGAAGAGAGAATAATAATGCATGTGGAGAGGGATTCATGTTCTCGTGTGTCAGAGAAATTGTCTGAATGCACCATTGAGAATTTTAGTTCATCATGTACCAAAGAGAGGGAACCTGTTGTTTCTGGTGAGAAAGGTATTGTGGTTAAGGATGGTCTTATCGAGAGTATTTCCAACGTTTCACTAAAAGTATGCCCAAAGTTAGAAGCAGATACTGAGGTATGTGAAGCTAACAATGAAGATCCTAAATGTTCAGTTCAAGAGGGACAGTGTGAGAAAGCTGCACAGTTGGTTAGATCGTCTGCGAAGCAGGAAACTCAATCTGAAGACGAGAGTGATGAATCAGATGTTGTGGAACATGATGTAAAGGTGTGTGACATCTGTGGAGATGCTGGTCGGGAGGATCTACTTGCTATATGTAGTAGGTGCAGTGACGGTGCAGAGCACACCTACTGCATGCGAGAAATGCTTGAGAAAGTCCCTGAAGGGGATTGGTTGTGTGAAGAATGCAAAGACGCAGAGGGGAATGAAAATAAAAAATCGGATGTTGAAGACAAGAAAATTGTGGAAGTTAGTTCAACCTCACAAGTTTCTGGCAAAAGACTTTCTGATAACATTGAAGTAGCTCCAGCAGCAAAAAGACAAGCTCTTGAATCAAGCACAGGGTCACCAAAGACGTCAAGCCCCAAGAGATTAGTTCCACTGTCCCGAGAATCTTCATTTAAGAGCTTAAATAAATCTAAGGTGAAGACTGGTCTTCCGATACCTAGTCGAAACAACTCTGGTGGTAGTGACACAGAGACTGCTCGCTCTCCTTCCATTGGTCCCCGGGGTCAAACTCCAAAGGGTATGTTGGTGAAATCTAATTCATTCAACAATGTAAATTCCAAGCCAAGAGTCAAACTTGTTGATGAAGTTGTTCCCCCAAAACCAAAAGGGGGTAATGAACATGCTTCAAAGAACATGGAGATGCCTGCTCGGATGACTGGCAAATCGACATTATTCAAATCTCAAAGTTTGGGGCGAACAAATGCAACTGAATCAAAAGTTAAAATGCTTTCACCCAAGTCTGCAGCTATGCAGGATTTGAAAGGATCTAGACATTTAAAAGAATCAGGTGCACTTGACAGGAAATTTCCATCTAGGATTGATCGGCCTGTGGTTAGTTCTTCTGTTTCCAGTCCTAAGGGTGATCAAAGGCTCACACCTCGTGCTGAATCCAGTAAACCTTCCGCAATGAACAACAATCGAGAGATGAAGGTTATTCAGGATGGAAAAGCAAGTGCACTATCAAGGTCAACGAGCAGTATAAACAGGAAAAGTTTGGAGCCTCAAGTTATTTCAGAGAGAACATCAACCCGTGTTGATGAAGCTCAACAGGATGTGCTGCCCAGAACACGGGAGACAGCTAATCAGATTGAGAAAAGCAGAGATAGTTCTAGTGACCGTGTAAGGCCAGCTGTTCCTACTTCTTCAAAAGGTTCATTCTGTCAAAAGTGTAAGGAATTTGGCCATGCTATTGAATGTTGCACCGCTGGCACTACACAAGAATCTGGTGCTGAAATATCTGTAACTACCTCAAGTAGTTCAAAAGATGAGATGCATAAAGGCAATATATTGAAAGCTGCTATCCAGGCTGCTTTACTTAGAAGACCTGAAATTTACAAAAAGAAAGAAGTATCTAACCAAACCGATGAGGTTTCTAACTCAGGCACAGATTTGAATTGTGAAGTGACTTCAAATGACCCCATCTTGGTTTCCAGCACACCGAAGAATAGTATGTCTGTTGAAGAAACCCCTGAACAACAGGAAATCCTTGAGAACTCTACCTCAGATTCTTCCAAATGTTCATCTGCCAATGATTTTAAGCAACTCAAGTCTTGTCCGACTGATTTTCGATCCCAACCAGGAAAGTTGGGATCCATTTGTCTTGCAGCTGGAAAACCTGTAGTGAGAGACATGTCTGATAAAGCCATGACATTGTCAATTGTTCCTTCGAAGACGTTGGCTTTTCCTGAATACGAATACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCTGATTTATATACTGGACTTCAGGCGCATTTATCCTCTTGTGCTTCTCCTAAGGTTCTTGGAGCAGTGAACAAGTTTCTACCTAAGGTTTCTTTCAATGAAGCTTCTCGCATGAGCTTGTGGCCTTCACAATTTCATCATGGTGGTGTTAGTGAAGATAATATAGCTCTATACTTCTTTGCCAGTGATGTTGAAAGTTATGAGAAACACTACAAAGGTCTTTTGGATCGCATGATTAGAAATGATTTAGCACTTAAAGGAAACTTTGAGGATGTTGAACTGCTGATATTCCCTTCCAATCAGCTTCCTGAAAATTCACAGCGCTGGAATATGTTGTTTTTCTTATGGGGCATATTTAGGGGAAGGAAGATGAATCATTCAGATTCTACAAAAAAGATTTGTATTCCCAGTTTGAATGGAATGCCGGTTGAGGAGAAATCTTCATCTGTTGTTTCAATGGTACCTGAAACACACAGTTTGCCAAAGTGCAAGGATGAAGAAACAATTGATCGGTATAGAGCATGCAATGCACTTGTCCCATCCACATCCACAGACCAACATCCAACCACCAGATGTAGGAATGTTGATGTCAACGACCAGAGACATTTAGATTTACAAGTAAACATAGAGAAGCTAGATGGCAGGATTGGATCAAAATGGGTTCCAACTAGCACGACTCTGTTATGTCAAGATATGAACTCCACTGATTCGTCTCTGAAATGCTGTTAG 3207 0.4157 MTQNTDMRIESGTCNVCSAPCSSCMHLNHALMGSKAEEFSDENCRIGAAIDQYSMDEDNAYSLRSRACESSQHTVSEASNMQSVNSSHDALSENAKSRQIIPNKYQDSKHLEGHDDNTSCISRASDTNSVNVSHQRNEERIIMHVERDSCSRVSEKLSECTIENFSSSCTKEREPVVSGEKGIVVKDGLIESISNVSLKVCPKLEADTEVCEANNEDPKCSVQEGQCEKAAQLVRSSAKQETQSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKDAEGNENKKSDVEDKKIVEVSSTSQVSGKRLSDNIEVAPAAKRQALESSTGSPKTSSPKRLVPLSRESSFKSLNKSKVKTGLPIPSRNNSGGSDTETARSPSIGPRGQTPKGMLVKSNSFNNVNSKPRVKLVDEVVPPKPKGGNEHASKNMEMPARMTGKSTLFKSQSLGRTNATESKVKMLSPKSAAMQDLKGSRHLKESGALDRKFPSRIDRPVVSSSVSSPKGDQRLTPRAESSKPSAMNNNREMKVIQDGKASALSRSTSSINRKSLEPQVISERTSTRVDEAQQDVLPRTRETANQIEKSRDSSSDRVRPAVPTSSKGSFCQKCKEFGHAIECCTAGTTQESGAEISVTTSSSSKDEMHKGNILKAAIQAALLRRPEIYKKKEVSNQTDEVSNSGTDLNCEVTSNDPILVSSTPKNSMSVEETPEQQEILENSTSDSSKCSSANDFKQLKSCPTDFRSQPGKLGSICLAAGKPVVRDMSDKAMTLSIVPSKTLAFPEYEYIWQGVFEVHRNGKPPDLYTGLQAHLSSCASPKVLGAVNKFLPKVSFNEASRMSLWPSQFHHGGVSEDNIALYFFASDVESYEKHYKGLLDRMIRNDLALKGNFEDVELLIFPSNQLPENSQRWNMLFFLWGIFRGRKMNHSDSTKKICIPSLNGMPVEEKSSSVVSMVPETHSLPKCKDEETIDRYRACNALVPSTSTDQHPTTRCRNVDVNDQRHLDLQVNIEKLDGRIGSKWVPTSTTLLCQDMNSTDSSLKCC* 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00183 1068 MobiDBLite consensus disorder prediction 352 411 - -
Phac2g00183 1068 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 242 333 IPR013083 -
Phac2g00183 1068 MobiDBLite consensus disorder prediction 700 755 - -
Phac2g00183 1068 MobiDBLite consensus disorder prediction 522 554 - -
Phac2g00183 1068 SUPERFAMILY FYVE/PHD zinc finger 247 308 IPR011011 -
Phac2g00183 1068 ProSiteProfiles Zinc finger PHD-type profile. 258 309 IPR019787 -
Phac2g00183 1068 MobiDBLite consensus disorder prediction 563 589 - -
Phac2g00183 1068 MobiDBLite consensus disorder prediction 590 618 - -
Phac2g00183 1068 MobiDBLite consensus disorder prediction 103 119 - -
Phac2g00183 1068 PANTHER - 258 977 - -
Phac2g00183 1068 MobiDBLite consensus disorder prediction 696 755 - -
Phac2g00183 1068 MobiDBLite consensus disorder prediction 476 627 - -
Phac2g00183 1068 SMART PHD_3 260 307 IPR001965 -
Phac2g00183 1068 MobiDBLite consensus disorder prediction 441 460 - -
Phac2g00183 1068 MobiDBLite consensus disorder prediction 76 129 - -
Phac2g00183 1068 MobiDBLite consensus disorder prediction 76 102 - -
Phac2g00183 1068 MobiDBLite consensus disorder prediction 499 519 - -
Phac2g00183 1068 MobiDBLite consensus disorder prediction 349 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00183 Phac-Chr2 980626 990110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00183 257 306 C2H2 Transcription Factor Family AT3G01460 38.000 9.29e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00183 - - vun:114172977 1878.22