Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00148 ATGGACATGGACACCCCAGAGAGGAACCAGATCAGTGCTACCCTCACCAAGTTTGAGGATTCACCTGTTTTCAATTATATCAACAGTTTGTCTCCTATAAAGCCCGTTAAGTCTGTTCCCATCAGTCAAACTTTCAATTCACTGAGCTTTTCGTCTCCTCCATCCGTTTTCACATCACCCCACGTCAGCTGTCTCAAGGAATCTAGATTCCTCAGAAGACATATCCCATTGGGCACATCAAAGCCTAAGGTTTCTTCTGAAGATGCAAGTAAAGTTCACACAAGTGAAGAGACTCTTGCAGATTCTACACGTCATAACTCGAGTGAATTACAGGAAAACACTGATAAAGGGATTTCTGTAGAAGATGCTTCGATTGAGCACATAAAATTCTCAGTTGAGCCACAGCAAACTCTAAAATATAGCAGTTGTGGTAGTCCTGGCTATGATCCCACACTTTGTGGTGATGAGGGTAACACCCTTTTGGAACTGCCCGATGAGGCAGCAGCAGATGAAACTGATTCAAGTGAAGGGCATCTTCAGAAAATGTGTCAGATGGAGCCAAAGAGTGAAGATCCAGAGTGTTATTGGGATAGTTTAGTTCCTGATGGACCTGATATGCTGATTTTTAATTCCCCAGGTGAAGCAGAAGCTTTTAAGGGTCTGATGCACAAACCTTTGGACTCTTCTATACGACTGAGCGATGTTATGTCTGTGCTGCCAATTTCTACCATCCATAATGGTAGGAAAATGTACTTTGTTGATTCGGTTGCTTCAGGTTCTGAACATGAAATTGGAGATCACTGTTTTGAACCAACTACAACAGCCACGGACACAGACCAAACCCAGGATAATCTTGCCGATGTCGTCTTCGTGACTAGCAATTCTAATGAGAACGCTAATGATCAGCTTGTTTCTGTCACTCACCGTGCCATAAGGAGGCGTTGTCTAGACTTTGAGATGGCCAATGTACAAAGGAAGAACTCTGAAGATAATTCAAACGCTGGTTCAAGTACATCCAATGAAAAGCAACTGCTTCCAGCAAAACTCAATGGGAATTTTCAGAGGGGAATTTTGCAGGGAATTGGTCTACACCTGAATGCACTTGCTGCCTTAAAAGAATACAAGGGCATACAAATTGAAAATTTGTCTTCTGGCACTTTGCAAATCTCTACAAGCATAGACCATCAGCATCTATCGTTGGCACCTGTATCATCTGAAAGAGAGTTGGATTCATCAGACAATGGGCTTCAGCCTGCTGAAGATTGTTCCCAGCCATCGGTTTACATGGCTGGTGAAGACTTCAATAAGAATAGTAGCCCCAGAAAGAAAAAGCGTAAGGTGGAGACACCTGGAGAAACTGAGGGCTGTAAACGCTGCAATTGCAAGAAGTCAAAGTGTTTGAAGCTTTACTGCGAGTGCTTTGCTGCTGGTGTCTACTGCATAGAACCCTGCTCCTGTCAGGATTGCTTCAACAAACCTATTCATGAAGACACAGTTCTTCAAACTCGCAAGCAGATTGAATCTCGTAATCCTCTTGCATTTGCTCCTAAAGTCATCAGAAGTTCTGATTCTGTTCCTGAAATTGGGGATGATCCAAACAAAACTCCAGCTTCAGCACGACACAAAAGAGGATGCAACTGCAAAAAATCAAGCTGCCTAAAGAAATATTGTGAATGTTATCAGGGTGGTGTCGGTTGCTCCATTAGCTGTAGATGTGAAGGGTGCAAGAATGCTTTCGGCAGAAAAGATGGTTCTGCTCCTGTAGGCATAGAAACTGACTCAGAAGAGATAGAAGCAACTGAGAAGGGTGTGGCAGAAAAAGCTTCACAGAAAGCAGAAATTCAGAACACTGAAGAAGATCATCCTGATTCTGCTACTGTGTCAACACCATTACGACTTTCCAGGCCATTGCTTCCATTGCCCTTTTCATCAAAGGGAAAGGCACCAATATCCTTTGTTACCACCATCTCAGGATCTGCATTATTTGCCAGCCAAAAGCTTGGGAAACCAAACTCTCTTTGGTCTCAATCTAAGCATTTTCAAACTGTCCCAGATGAAGAAATGGCAGATATTCTCCTAGGTGATACCTCTCCTATCACATGCATCAAAACTTCTTCTCCAAATGGCAAGAGAATCTCCTCTCCCAGCTGTGACTTGGGATCATCACCTAGTCGCAGAGGTGGAAGAAAGTTGATATTACAATCCATTCCTTCATTTCCTTCTCTCACCCCTCACCCTTAG 2241 0.4328 MDMDTPERNQISATLTKFEDSPVFNYINSLSPIKPVKSVPISQTFNSLSFSSPPSVFTSPHVSCLKESRFLRRHIPLGTSKPKVSSEDASKVHTSEETLADSTRHNSSELQENTDKGISVEDASIEHIKFSVEPQQTLKYSSCGSPGYDPTLCGDEGNTLLELPDEAAADETDSSEGHLQKMCQMEPKSEDPECYWDSLVPDGPDMLIFNSPGEAEAFKGLMHKPLDSSIRLSDVMSVLPISTIHNGRKMYFVDSVASGSEHEIGDHCFEPTTTATDTDQTQDNLADVVFVTSNSNENANDQLVSVTHRAIRRRCLDFEMANVQRKNSEDNSNAGSSTSNEKQLLPAKLNGNFQRGILQGIGLHLNALAALKEYKGIQIENLSSGTLQISTSIDHQHLSLAPVSSERELDSSDNGLQPAEDCSQPSVYMAGEDFNKNSSPRKKKRKVETPGETEGCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLQTRKQIESRNPLAFAPKVIRSSDSVPEIGDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAFGRKDGSAPVGIETDSEEIEATEKGVAEKASQKAEIQNTEEDHPDSATVSTPLRLSRPLLPLPFSSKGKAPISFVTTISGSALFASQKLGKPNSLWSQSKHFQTVPDEEMADILLGDTSPITCIKTSSPNGKRISSPSCDLGSSPSRRGGRKLILQSIPSFPSLTPHP* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00148 746 SMART CXC_2 454 495 IPR033467 -
Phac2g00148 746 SMART CXC_2 540 581 IPR033467 -
Phac2g00148 746 MobiDBLite consensus disorder prediction 605 629 - -
Phac2g00148 746 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 543 578 IPR005172 -
Phac2g00148 746 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 457 492 IPR005172 -
Phac2g00148 746 MobiDBLite consensus disorder prediction 76 119 - -
Phac2g00148 746 MobiDBLite consensus disorder prediction 403 421 - -
Phac2g00148 746 MobiDBLite consensus disorder prediction 605 620 - -
Phac2g00148 746 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 3 745 IPR044522 GO:0003700
Phac2g00148 746 MobiDBLite consensus disorder prediction 704 746 - -
Phac2g00148 746 MobiDBLite consensus disorder prediction 436 455 - -
Phac2g00148 746 MobiDBLite consensus disorder prediction 704 721 - -
Phac2g00148 746 MobiDBLite consensus disorder prediction 86 119 - -
Phac2g00148 746 MobiDBLite consensus disorder prediction 403 455 - -
Phac2g00148 746 ProSiteProfiles CRC domain profile. 455 580 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00148 Phac-Chr2 833809 839698 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00148 18 745 CPP Transcription Factor Family AT4G14770 45.394 4.36e-162 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Phac2g00148 TCR 1.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00148 - - gmx:100815907 1216.45