Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00138 ATGGCGAGTGATGGTGTGGTGTATTTGCCTCCAATGGCTGCCGAAGTGTACGGTGAGGGGTTACCGTACGCTCCGGAGAATTGGCCGGAGGAGGGTGATGTTTGGGGGTGGAGAACCGGCCGGAGAGTGGTGCCTAACGGCACGCACTTTCAGGATCGGTATCTGTATTTGCCAAAACGGCTGCACCAGCTGCTGAAGGAAGAGAAGGAGACACCAGAGCCTGCTTCAGGCTCAGGGTCTTCTTCAAAAGCTCGCAAGCAACACATCTTTGCGAGCAAGCTCGGTGTGAAAGCCTACGTCATTAGACATTATCCTGACACCGATCTGAAAGTGTTTTTCGATTCTTTCTCATGGAAGATTCCTGCTATAACAACTTTCGGAAGTCCAGTCCCCATAGCTGCTCTACCTCTTCGACAGATATCAGAAGAAGCACGTCAAGCGAACTGTATGTTGGTTTTCAAGTGCAATGCAAACAATGAGGGGTGCCCTAGTGTTGTCTTGGAGAAAATAGAGTGTTTACACGCCATGCCGTGTGATATCTGCTGCACTGAACCTCTCTTTTGCCGTGCTTGTTCTTGCATGCTTTGTGGCAAAACTGTTTCCACAGAGTATGGCAGCTACAGTTATGTGAAGTGCCAAGTGAATTCTGGAACGGGAATCTGTGGCCACGTTTCTCATGTTGAATGTGCTCTCCAATGCTTCATGGCTGGCAAAGTTGAAGGAGCTATGATGCTGGATGCAGAGTACCACTGTCGCCGCTGTGATGGAAGAACTGACATGATTCCTCATGTCAGTAAAATCATGCAAACATGCAAAACCATGGATTCCCATGACCAGATTCTGAAGCTTCTGAACCTTGGTTCTGCTGTCTTGCGTGGTTCGGAGAAACCTGCTGCAAAGGACCTCCTCGATCGAGTTGAATTGACCATCTCAAAGGTTAAATCTGGAACCAATCTTGAAGATATCTGGAAGGAGGATGATAATGGCAATGATGTGATGGATGTCACAGTGGATAAAGTTAAGAAGGAGTTGGAACTTTATAATGGTTTACCCTTTTCAGTAAATCTTGATGTTGATTCAAATCAGCTTATGAAGAATTTTAGAAAGTCTCAGGAGCTTGAATATAAGGTGGTTGAAGAAATAATTTATGCACATAAAATCTATCTTAACAATCTGCATGAGCAACTGGAATATGAGAAAAGTTTATTGAAAGGTCGAAAGTCATCTGCTTCTTCCAAGCTCTCTGTGAGAGAGAGAAAGAAACAGATGAAACGGGAGTTGAATAAATATGTACTGATGAAGAAGGTGGGCTATGGTTTCAGCAGGACGCCCCATGCTATCACAAAGAAATACTTTGGCTTTAAACCAGTAAAGTAA 1377 0.4488 MASDGVVYLPPMAAEVYGEGLPYAPENWPEEGDVWGWRTGRRVVPNGTHFQDRYLYLPKRLHQLLKEEKETPEPASGSGSSSKARKQHIFASKLGVKAYVIRHYPDTDLKVFFDSFSWKIPAITTFGSPVPIAALPLRQISEEARQANCMLVFKCNANNEGCPSVVLEKIECLHAMPCDICCTEPLFCRACSCMLCGKTVSTEYGSYSYVKCQVNSGTGICGHVSHVECALQCFMAGKVEGAMMLDAEYHCRRCDGRTDMIPHVSKIMQTCKTMDSHDQILKLLNLGSAVLRGSEKPAAKDLLDRVELTISKVKSGTNLEDIWKEDDNGNDVMDVTVDKVKKELELYNGLPFSVNLDVDSNQLMKNFRKSQELEYKVVEEIIYAHKIYLNNLHEQLEYEKSLLKGRKSSASSKLSVRERKKQMKRELNKYVLMKKVGYGFSRTPHAITKKYFGFKPVK* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00138 458 Pfam PHD - plant homeodomain finger protein 159 287 IPR032881 -
Phac2g00138 458 PANTHER ADAPTER PROTEIN, PUTATIVE-RELATED 9 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00138 Phac-Chr2 775456 778699 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00138 165 314 PHD Gene Family AT5G57380 27.333 1.42e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00138 - - pvu:PHAVU_002G044800g 825.469