Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00128 ATGGAATCAGAAGTGAGATCGGGTGGTTCTGGGGTTGTGGTGAAGAGCAGAAATTCCTCGGGTTGTTTGATTGTGCGGAAGAAAGGGGATGGGTTGGATGCTACTGCTTCCACCTCTAGGAAGTTCTATGAATCCAAGAAAAGGGCCAACATCAGTGTGCCTGTCAGTGATTCTGGATCAAGTGACGAGTTGCTGATTCCACCTGGTAGAAGGCTTGGGTCTGAGACTATTCGTGTTTGCAATGGTTTGGCTGCGTCTGAGAGGGTTGGGAGTGAGATTAGTCGGAAGAGGGACAGAATGGAACGAATTAGGGATGCGGATAAAGGTTTGGAGCAGTGGGTGAATAAGCGTAGTAAGTTGGATGTGTACAATTTAGAAGAATATGATGGTATGGATGTGGAGAACATGAGGAGGAGGCATTTGGATGGTAATGCAGCTGGTTTTGGAGGAAGAAGTTTTATGGGGTCGGTTCATGCTACTAGGAGTGGCATTGATAGGGAATTGAAGAATGGGTCAAGTGGTCGTCTTGTTGATAAGCGGAAGAACTCTTATGTAGACAGGTCAAGTGGCTTGTTTCCTGGAGATAATCTTGATCGCATTAGGTTCAAGAGTAACAGAGATGGTGTTCGGCTACCTATACCCTTGCAGAGGGAGAAGTTTAATTCGGATGAGTCTATCAGGGTTCAGGGGAAAAATGGTGTTTTGAAGGTAATGGTTAATAAGAAGAAGGTGTGTGGGCAATCAGAACAGTATTACAATCATCACAAACCTGTGGAAAGCTGGCAAAGGTTGAAACCTGAAGAGCCCATCAAGAGGATGAAGATTGAAGAGACTGCCAAGAGGAATGTTCCAACTCGTCCTTCATCAAACCTGGAAACAAAACCTGTTGAGAAACCAGGAGTACTCAAGAGGGTGGAGAAGAAACAGATAGCATCAAGAAAATATTTGTCAAGCAAGGATAGCAAGGGTGATGAGGGGGGTTCAGATAACAGTGACACATCATTAAATCCCGGGGTAAGAAATACTGTAGCTCGTGAGCCTGTGAAAAAGATGTTCTCCGAGGATGAACAGACTCCTGTGCATGATAAACTCTCAACCACAAAAGCGAAAGAAGGAAAAATCAAGCGTGGTAGTGGTACAGAAAAACAGAAACTGCGAGAGCGAATTCGGGAGATGCTGCTGACTTCAGGTTGGACCATAGACTATAGACCTCGAAGGAACAGAGACTACCTGGATGCAGTTTACATTAATCCAGCAGGTACAGCCTATTGGTCTATCATCAAGGCCTATGACGCCCTTCAAAAGCAATTGAATGAAGATGCTAATGAGGTCAAAGCCAAAGGGGATAGTGCTTCTTTTACACCTATTGCAGATGATGTGCTCAGTCAGCTAACAAGGAAAACTAGGAAGAAAATGGAGAAAGAATTGAAAAACAAGAAGAAAAATTATGATAGTGAAAGTGATAATGAAAAAGAGCCTGAAATAAGAAGATCTGCCAGCAACAAGAATGATATGAATAGCACTGATAGTGATAACAATGAGGAGAAATTAAGCTCCTTTATAAAACAGGGAAGTAAGTCGATGAAAAATAAAATGTTTGAAAGTAACGTTATCAGTGCTCGCTCTAAAATCCAGAATGCTACCCATCACTCAATTGACGGAATAGAAAAATCATCTGGATGTGATTCTCGTATACATGGACGGAAGAGTAATAAACACGGAAGATGTACCTTGTTAGTTCGCAGTTCTAACAAAAGATCAAATTCAGAATCTGATGGCTTTGTCCCATATACAGGAAAACGGACAGTTCTTGCCTGGTTGATCGACTCTGGAGCAGTAGAGTTAAGCCAAAAGGTTCAGTACCGCAGACGGAAGAAAGTCCTGCTTGAGGGGTGGATTACAAGAGATGGCATACATTGTGGCTGCTGTAGTAAAATCCTCACAGTTTCAAAGTTTGAGCTTCATGCAGGAAGCAAATTGCCACAGCCATATCAAAATATTTTTTTGGAATCTGGAGTTTCTCTTCTACAGTGCCAGATAGATGCATGGAATAGACAAGAGCATTCTGAAAAAATTGGTCTCCATTCAGTAGATATTGACGGTGATGATCGAAATGATGATACATGTGGTATTTGTGCAGATGGAGGGGATTTAATCTGTTGTGATGGTTGTCCATCAACATTTCATCAGAGGTGCTTGGATATACAGATGCTTCCTCCTGGTGAATGGAATTGTCCAAATTGCACCTGTAAATTTTGTGGCATAGCCAGTGAACTTTCTGAAAAAGATGACGCATCAGTGTCTATCTTACATACATGCAACTTATGTGAGAAAAAATATCATGACTCTTGCGCTAATGAGATGGATGCCCTTCCTAATAACCTCAATACATCAGGCCTTTCTTTTTGTGGGAAAGAGTGCAGAGAGCTTTCTGAACAATTGAAGAAGTATCTTGGTATCAAGCATGAACTAGAAGCGGGTTTTTCATGGTCTCTCATTCATAGAACAGATGAAGACTCAGAGGCAGCTTGCAAGGGAATTAATCAGAGGGTAGAATGTAATTCAAAATTGGCTATTGCATTGTCTGTGATGGATGAATGCTTTTTACCTGTTATTGATCGGAGGAGTGGGATCAATTTAATCCGTAACATTTTATATAATAGTGGATCAAACTTTAATAGGTTGAGCTATGGTGGCTTTTACACTGCTATTTTGGAGAGAGGGGATGAAATCATTTCTGCGGCATCTATCAGGTTCCATGGAACTGAGATAGCTGAGATGCCATTCATTGGAACTCGTCACATATATAGGCGTCAAGGGATGTGTCGCCGGCTTTTTTCTTCCATTGAATCGGCCCTTTGCGCTATGAAGGTTGAAAAACTAGTTATTCCTGCAATTGCTGAACTAACACATACATGGACAACAGTTTTTGGTTTCACACATCTGGACGAATTACTCAGACAAGAAATGAGGTCACTGAATATGGTGGTCTTCCCTGGTATTGATATGTTACAGAAGCTGTTAGCGGAAGGTTCTGAGAAAATGGGAAATGAAGACAACGATTTTATCCATACCAAAATGGGAAATAGGTCAGATATGGGTTCTTCAACTCCACAAGATCCTCATGGAAGTGATGATGTTAGTTCAAATCCTGCTAATGAGACAAATGATGAATGCAGCGATGCTTCTCGAGAAATAAACCAAGTTTTGGTTGACGGGATTCTCTGTTCCAAATCTCATTCTGAGGAAATGGTCTCTGATTCAATTTCAGATAAATGTGTTTCTCCTTCTAGAACTAGTCACAGTGCACTAGAAATGAAGAATAAAGTGCTTGCTGCTCCTCCTGCTGATAAATTAAATCCCACTTCTGTGAGAAGTCACCCAGAAGATATTCCAAATGTTCAAGCTTTGGTTCAGGAAACTGCCTGTTCTGATCCATGTTCAGCAGAAAACCTTGACAAGAAATGTCGCTCGATCACTGCTATGAATTGTGATTCGCTGGAGCTTGACATTAATCCAGTTTTGAATTCTCAAAAGTCAGACAACACTCCACCTACTAAAGAGGCTTATATGAATGATGCTCTTGAAGCTGTTACTTCAGGGATTTTGTCAGAAGAGAATATTATTCCAAAGGGAAGTAATCAAAATGTAGATGTCTCCATTTCTGCTCTCAATCATGACGATGAGAGTTTGTTGCAACTAGGATCTGCTTCCAACTCTGAAAACGGATGTAAAAATGGGAAGGATTTGCTTTTGAGCCCAATAGTTGCTTCAAATGAAACATGTGTGGATGAAAATGGCGTAAATGCTTCCGGTGATAGTTCCGAGACTGTTGTGGTCTAA 3843 0.4132 MESEVRSGGSGVVVKSRNSSGCLIVRKKGDGLDATASTSRKFYESKKRANISVPVSDSGSSDELLIPPGRRLGSETIRVCNGLAASERVGSEISRKRDRMERIRDADKGLEQWVNKRSKLDVYNLEEYDGMDVENMRRRHLDGNAAGFGGRSFMGSVHATRSGIDRELKNGSSGRLVDKRKNSYVDRSSGLFPGDNLDRIRFKSNRDGVRLPIPLQREKFNSDESIRVQGKNGVLKVMVNKKKVCGQSEQYYNHHKPVESWQRLKPEEPIKRMKIEETAKRNVPTRPSSNLETKPVEKPGVLKRVEKKQIASRKYLSSKDSKGDEGGSDNSDTSLNPGVRNTVAREPVKKMFSEDEQTPVHDKLSTTKAKEGKIKRGSGTEKQKLRERIREMLLTSGWTIDYRPRRNRDYLDAVYINPAGTAYWSIIKAYDALQKQLNEDANEVKAKGDSASFTPIADDVLSQLTRKTRKKMEKELKNKKKNYDSESDNEKEPEIRRSASNKNDMNSTDSDNNEEKLSSFIKQGSKSMKNKMFESNVISARSKIQNATHHSIDGIEKSSGCDSRIHGRKSNKHGRCTLLVRSSNKRSNSESDGFVPYTGKRTVLAWLIDSGAVELSQKVQYRRRKKVLLEGWITRDGIHCGCCSKILTVSKFELHAGSKLPQPYQNIFLESGVSLLQCQIDAWNRQEHSEKIGLHSVDIDGDDRNDDTCGICADGGDLICCDGCPSTFHQRCLDIQMLPPGEWNCPNCTCKFCGIASELSEKDDASVSILHTCNLCEKKYHDSCANEMDALPNNLNTSGLSFCGKECRELSEQLKKYLGIKHELEAGFSWSLIHRTDEDSEAACKGINQRVECNSKLAIALSVMDECFLPVIDRRSGINLIRNILYNSGSNFNRLSYGGFYTAILERGDEIISAASIRFHGTEIAEMPFIGTRHIYRRQGMCRRLFSSIESALCAMKVEKLVIPAIAELTHTWTTVFGFTHLDELLRQEMRSLNMVVFPGIDMLQKLLAEGSEKMGNEDNDFIHTKMGNRSDMGSSTPQDPHGSDDVSSNPANETNDECSDASREINQVLVDGILCSKSHSEEMVSDSISDKCVSPSRTSHSALEMKNKVLAAPPADKLNPTSVRSHPEDIPNVQALVQETACSDPCSAENLDKKCRSITAMNCDSLELDINPVLNSQKSDNTPPTKEAYMNDALEAVTSGILSEENIIPKGSNQNVDVSISALNHDDESLLQLGSASNSENGCKNGKDLLLSPIVASNETCVDENGVNASGDSSETVVV* 1281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00128 1280 MobiDBLite consensus disorder prediction 297 327 - -
Phac2g00128 1280 MobiDBLite consensus disorder prediction 347 383 - -
Phac2g00128 1280 Pfam PHD-finger 709 751 IPR019787 -
Phac2g00128 1280 ProSiteProfiles Zinc finger PHD-type profile. 706 751 IPR019787 -
Phac2g00128 1280 MobiDBLite consensus disorder prediction 272 383 - -
Phac2g00128 1280 Coils Coil 462 489 - -
Phac2g00128 1280 MobiDBLite consensus disorder prediction 1029 1057 - -
Phac2g00128 1280 SUPERFAMILY FYVE/PHD zinc finger 698 754 IPR011011 -
Phac2g00128 1280 MobiDBLite consensus disorder prediction 47 67 - -
Phac2g00128 1280 Coils Coil 427 447 - -
Phac2g00128 1280 MobiDBLite consensus disorder prediction 472 499 - -
Phac2g00128 1280 SMART PHD_3 708 749 IPR001965 -
Phac2g00128 1280 SMART PHD_3 750 808 IPR001965 -
Phac2g00128 1280 MobiDBLite consensus disorder prediction 472 518 - -
Phac2g00128 1280 Pfam Tify domain binding domain 631 681 IPR032308 -
Phac2g00128 1280 CDD PHD2_CHD_II 709 748 - -
Phac2g00128 1280 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 697 799 IPR013083 -
Phac2g00128 1280 PANTHER PHD FINGER PROTEIN 12 365 1139 IPR042163 GO:0003714|GO:0045892
Phac2g00128 1280 ProSitePatterns Zinc finger PHD-type signature. 709 748 IPR019786 -
Phac2g00128 1280 MobiDBLite consensus disorder prediction 500 518 - -
Phac2g00128 1280 MobiDBLite consensus disorder prediction 1015 1061 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00128 Phac-Chr2 735722 742470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00128 6 1009 PHD Transcription Factor Family AT4G14920 49.225 0.0 889
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Phac2g00128 TDBD 5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00128 - - gmx:102666194 2019.59