Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00117 ATGTCTTTAGCTATCTTTCTCTCTTCCATTCTTGTACTACTTTCACTTCTGAATGGCTTCCATGCCACCATACAACCAAACACACACATCACTGCTGGATCAAACTCTACCTGGAAGTCACCCTCTGGTGATTTTGAATTTGGATTCCTCCATCTTCGCAGTGATCTCTTTCTTGTGGGAATATGGTTAGGGAGAATCACAGAGAGAAAGCTGGTATGGTACAGAGCTCCCCCAATGGAACCAAATTCCCAAATCCAATTCACTTCTGCAGGAAAACTTGTGGTTGTATACCCAAATGGAACTACTGCTCAGACCATATACAGTGGAGCGGCAACATCTGCCACCATGCAAGACGATGGCAATTTTGTCATGAAGGACTCCAATTCAAGATTTGTGTGGGAAAGTTTCAACTTTTCAGCCAACACAATCTTACCAGGCCAAACCTTGCAGATTAATCAAACCCTCTTTTCCAAGGGGAGAGGACCTTCAAACTACTCACAGGGAAATTTCATGCTCCTAATGCAAAAAGATGGCAACTTGTTGCTCCAAGCTCACCAATGGTCTGACCCTGCTTACTGGTTTTCTTCAACCCTAAACTCCAATGTGAGGTTGGTGTTTAATGCTTCCACTGCTCTCATGTACCTTGTCAACGACACCGGGAAAATCTTCAATCTAACCAAAACCACTCCAACCCCAGTGGAGGATTACTATCACCTTGCTACAATAGAAGAGAATGGGAATTTCCAGCAATATGCATATCACAAGAGGAATGGGACAGAATGGAGCAGGGTTTGGAGAGCTGTGGAAGATCCCTGCAGAGTGAATGTTGTATGCGGTGTGTATGGCTTGTGCACTTCTCCTGACAATGAATCAGTGAAGTGTGAGTGTATTCCAGGTTATATCCCATTGGATGATCAAGATGTTTCCAAAGGGTGTCACCCACCATCTGTCATCAATTATTGTGCAGAGAGCAACTTCGAGCTCCAGGTCTTAGACGATACTGATTTCAATTTTGATATTCGTCATTTTAGTTTTGATAGTGTTGACTTGGAAAGTTGTAAGAAGGGTGTAATAGATGATTGTAACATAGTTGCTGCAACTTATAACCATTCCACCTCCACATGTGTGAAGAAGAGACTGCCCTTACTGAATGCTAGAAATAGCTCTTCTTCAAAGGGAATGAAAGCACTGCTTAAAGTTGCTCACAGGGTTGAGCCTGGGACACCTAAAGTTCCCAACAAGAAAAGTTTTAATGTCAGAGTCTTTTTGAAGGTTCTTCTTGCAGTTACTGCCACTCTTGCTTGTTTCTTGGGTGCCCTTGCTGTCTACTATCATCCTTTTGCTCGGAGACTAACAAGAAGAAGGAAGCATCTGAATGCAACCGCTATTGGAATCAACTTCAGGGAATTCACCTTTCAGGAGCTGCATGAAGCAACAGAGGGATTCACTAGGATTCTTGGAAGGGGAGGTTCCGGAAAAGTGTATCGTGGTGCTTTGATAATAGATGGTGCAGAGATTGGTATTGCAGTGAAGACACTGGAAAAGAAAATTGAGAAAAGTGAAAGTGAATTCATGACTGAGCTCAAAATTATTGGTCGTACCCATCACAGGAATTTGGTGAGGCTTTTGGGGTTTTGCTTTGAGAGTAGCCATCGAATTATAGTGTATGAGTTGATGCCAAATGGAGCACTCTCCAGTTTTCTGTTTGGAGAGGGAGAAAGGCCTGAATGGGGTCAGAGGATTGAAATGGCTCTTGGAGTCGCAAGGGGGTTGCTATACTTGCATGAAGAGTGCAACACCCAGATCATACATTGTGACATCAAGCCCCAAAATGTGTTACTTGATGCCAATTACAGAGCAAAGATTGCAGATTTTGGGTTGTCCAAGCTTTTGAAGAAAGATCAAACTAGAACAAACACTAATTTAAGAGGCACAATGGGATACATGGCACCCGAATGGCTAAAGAGTGCACCGATAACTGCTAAAGTTGACATATACAGTTTTGGGGTTATGTTATTGGAGATTATTTGCTGTAGAAAGCACGTTGAGGTTTGTGAGGGTGGAAAAGACAGTGAAGATGATGAAGTGGTTCTTTCAAAATGGGTTTTAAGGTGTGTGGTGTTTAGGCAACTAGAGCTAGTGGTGAGACATGACTCGGAAGTGTTGAATGATTTCAAGAGGTTTGAGGAAATGGCCTTGGTTGGACTATGGTGTCTTCATCCAAATCCTGCTCTGAGACCTTCAATGAAGCACGTGATGCAGATGCTAGATGGAACCGTGGAAGTTGGTGTTCCTCCTTTGGTTTATGAACAGATGATGGCAGATCAAAGCCTATATTCTTGCTCATTCATTCCTTTTGTTCCAATGTTGTGTCTGCTACTGTTGATCATCTTTCTCCTCCCTCTCAGAGGGGAATCAACGTGCCGCACCATCTCATGCGGCAAAATCAAAATTCACTTTCCGTTTGGTCTGAAACAAACTCCAATCGAAGCTACAATTTCTGGTCGGTGCAGCTATCCGAGGTTCCAGCTTTCCTGCGACAACCGCAACCGAACCATTCTGAGCCTCCCAGGTTCCGGAGATTTGGTGGTGAAAAGCATAAATTACGAGTCCCAAACTCTTACCGTGAACGACCCCGAAGGTTGTCTCCCGAAACGTTTCTTGCAGAACCTGAGCCTTTCCCTGCACCCACCGTTCACGTTTGAGGCAACCGTTTACGACCTAACGTTCCTTCGTTGTCCTTCCAACAGAACACACTCCGTTGAATCTCCGGCAATTTCATGCCTCGATTCGAATTCCTCCTCCTCGGTGACATTCTCGTGGTGGCCTCTGAATGGCACGTCGCCGTGGAGTGAGGAGTGTGAGGTGATATCCTCGGCTTTTGTTCCCATTCCAAATCCAGACACGACATCGTTTTCCATGCCTGATCTCAACAAGGATGTCGTGTTAAAGTGGAACGAACCCGCGTGTGGGGATTGTGCTGGTCGTGGCCAAGTTTGTGGGTTCACCCCTCACACCAAAACTTTACAAGTTGGATGCTTCTTCTATGCTCCTAACCAAAACCAAGGTCTTTCAAGAAGCGCCAAATATGGGTTAACGATCGGAGTGGGAATACCTGGGCTCCTATGTTTAACTGGGCTTTGCTGCTTTATGTGTAGTAAATTCGATGTGTACACACATGGTAACCGGGCCAGGCCCATCAGAGAGCTTCCAAGCTCCATTACCACTCTTCCACGATCCTCGCCAACAATGGGCCTTATTGGGCCGGAAATTGAAAAATTGCCCAAGACTCTTATTGGTGACAGTGGGCGCTTACCGAATTGGAACGATAACACGTGTCCAATTTGTCTCTCCGAATACGAGCCCAAGGAGACGCTAAGGACCATTCCTGCGTGCAACCACTATTTTCATGCACACTGCATTGATGAGTGGCTGAAGATGAACGCCACGTGTCCCTTATGCAGAAATTCACCCGATCCATCTTCTTTGCAATAG 3495 0.4501 MSLAIFLSSILVLLSLLNGFHATIQPNTHITAGSNSTWKSPSGDFEFGFLHLRSDLFLVGIWLGRITERKLVWYRAPPMEPNSQIQFTSAGKLVVVYPNGTTAQTIYSGAATSATMQDDGNFVMKDSNSRFVWESFNFSANTILPGQTLQINQTLFSKGRGPSNYSQGNFMLLMQKDGNLLLQAHQWSDPAYWFSSTLNSNVRLVFNASTALMYLVNDTGKIFNLTKTTPTPVEDYYHLATIEENGNFQQYAYHKRNGTEWSRVWRAVEDPCRVNVVCGVYGLCTSPDNESVKCECIPGYIPLDDQDVSKGCHPPSVINYCAESNFELQVLDDTDFNFDIRHFSFDSVDLESCKKGVIDDCNIVAATYNHSTSTCVKKRLPLLNARNSSSSKGMKALLKVAHRVEPGTPKVPNKKSFNVRVFLKVLLAVTATLACFLGALAVYYHPFARRLTRRRKHLNATAIGINFREFTFQELHEATEGFTRILGRGGSGKVYRGALIIDGAEIGIAVKTLEKKIEKSESEFMTELKIIGRTHHRNLVRLLGFCFESSHRIIVYELMPNGALSSFLFGEGERPEWGQRIEMALGVARGLLYLHEECNTQIIHCDIKPQNVLLDANYRAKIADFGLSKLLKKDQTRTNTNLRGTMGYMAPEWLKSAPITAKVDIYSFGVMLLEIICCRKHVEVCEGGKDSEDDEVVLSKWVLRCVVFRQLELVVRHDSEVLNDFKRFEEMALVGLWCLHPNPALRPSMKHVMQMLDGTVEVGVPPLVYEQMMADQSLYSCSFIPFVPMLCLLLLIIFLLPLRGESTCRTISCGKIKIHFPFGLKQTPIEATISGRCSYPRFQLSCDNRNRTILSLPGSGDLVVKSINYESQTLTVNDPEGCLPKRFLQNLSLSLHPPFTFEATVYDLTFLRCPSNRTHSVESPAISCLDSNSSSSVTFSWWPLNGTSPWSEECEVISSAFVPIPNPDTTSFSMPDLNKDVVLKWNEPACGDCAGRGQVCGFTPHTKTLQVGCFFYAPNQNQGLSRSAKYGLTIGVGIPGLLCLTGLCCFMCSKFDVYTHGNRARPIRELPSSITTLPRSSPTMGLIGPEIEKLPKTLIGDSGRLPNWNDNTCPICLSEYEPKETLRTIPACNHYFHAHCIDEWLKMNATCPLCRNSPDPSSLQ* 1165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00117 1164 Pfam D-mannose binding lectin 76 154 IPR001480 -
Phac2g00117 1164 SUPERFAMILY RING/U-box 1107 1157 - -
Phac2g00117 1164 Gene3D - 139 277 - -
Phac2g00117 1164 ProSiteProfiles Zinc finger RING-type profile. 1113 1155 IPR001841 -
Phac2g00117 1164 SMART ring_2 1113 1154 IPR001841 -
Phac2g00117 1164 Gene3D Phosphorylase Kinase; domain 1 454 558 - -
Phac2g00117 1164 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 559 764 - -
Phac2g00117 1164 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 199 IPR036426 -
Phac2g00117 1164 SMART serkin_6 480 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00117 1164 CDD STKc_IRAK 486 758 - -
Phac2g00117 1164 ProSitePatterns Protein kinases ATP-binding region signature. 486 511 IPR017441 GO:0005524
Phac2g00117 1164 Gene3D Transferase(Phosphotransferase) domain 1 559 763 - -
Phac2g00117 1164 Pfam Protein kinase domain 484 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00117 1164 Gene3D - 15 138 IPR036426 -
Phac2g00117 1164 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 29 766 - -
Phac2g00117 1164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1081 1160 IPR013083 -
Phac2g00117 1164 Pfam Ring finger domain 1111 1155 IPR001841 -
Phac2g00117 1164 SMART blect_4 29 139 IPR001480 -
Phac2g00117 1164 Pfam Wall-associated receptor kinase galacturonan-binding 808 878 IPR025287 GO:0030247
Phac2g00117 1164 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Phac2g00117 1164 Pfam S-locus glycoprotein domain 236 302 IPR000858 GO:0048544
Phac2g00117 1164 ProSiteProfiles Protein kinase domain profile. 480 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00117 1164 CDD RING-H2_EL5-like 1113 1155 - -
Phac2g00117 1164 FunFam S-receptor-like serine/threonine-protein kinase 449 558 - -
Phac2g00117 1164 SUPERFAMILY Protein kinase-like (PK-like) 467 773 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00117 Phac-Chr2 681230 687289 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00117 406 762 Receptor kinase-like Gene Family AT2G43700 34.435 9.41e-64 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phac2g00117 Pkinase 2.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00117 - - gmx:102662509 1196.03