Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00096 ATGATGCATGGCCAAAACAAGGCACTAGTAAGTATGGCAATCCAAGAATCTCTGCTAGAGAGGCCAAGAAACTCTGCTACCAAAACTATCTGTTTAATCTTCTCTGTAGCTGCTGTCATATGCTCATCAGTCTTTGCTGCTTCTTATTTCATCAAACCCAGTTCCTTCCTTAACCAATCCTCTCCTCAACATCTCTGTCATCATGCACTTGATAACCCATCATGCTTAGCACATCTCTCAGAAGTGGTTCAAGGTCCCATCTTGACCACAACAAAAGACCACAACTTCAATTTGTTCCACTCTTTCTTATTGAAATCCACCTCGCACATTCAGAGAGCCATGAACACAGCTAGTTCCATCAGAATTAGGGTTAACAGTCCCAAGGAGGAAGCAGCTTTGAACGACTGTGTGGAGCTGATGGAGTTATCCATCGACAGAGTTTTGGACTCAATGCTAACTCTAACAAACCAAACCACTGAGTCACAGCAAGACGCGCACACATGGCTAAGTAGCGTGCTCACTAACCATGCAACTTGTTTGGATGGGTTAGAGGGGACAGCTCGAGCGCTTATGGAGGCTGAACTTGAGGACTTGATATCCAGAGCAAGAACCACTCTGGCTATGTTTGTGACTGTTTTGCCCCCGAGGGTTGAACCAATCGTTGATGAGCCACTGAATGGGGGGTTTCCCTCGTGGTTGAGCAGCAAGGATAGGAGGCTTTTGGAGTCCAGTGTTGGGGACATCAATGCCAACGTTGTGGTGGCAAAGGATGGAAGTGGCAAGTTTAAGACTGTGGCTGAGGCTGTGGCATCTGCACCTAATAACAGTAAGACAAGGTATGTTATTTACGTGAAAAAAGGAACATATAAAGAGAATGTTGAAATTGGTCAGACAAAGAAGAACGTGATGCTCGTTGGAGATGGTAAGGATGCAACTGTAATTACTGGCAGCTTGAATGTCATCGACGGAACGTCCACATTGAAGTCTGCCACTGTGGCTGCTGTGGGGGATGGATTTATAGGTCAAGACATATGGTTCCAGAACACTGCAGGTCCACAGAAGCAACAAGCAGTGGCTCTGCGCGTAGGGGCCGACCAATCCGTCATAAACCGTTGTCGCATAGATGCTTTCCAAGACACTCTCTACGCACACTCCAACAGGCAGTTCTACACAGACTCTTTCATCACCGGCACCGTTGACTTCATTTTTGGAAATGCTGCCGTCGTCTTCCAAAAGTGCAACTTGGTTGCCCGAAAGCCCATGAGTAACCAAAAAAACATGGTGACGGCTCAAGGAAGAGAAGATCCAAACCAAAACACAGGAACTTCAATTCAAAAATGTAACCTAACACCCAGCTCAGATCTTAAGCCTGTTGTGGGTTCCATCAAAACTTTTCTGGGTCGACCATGGAAGAAGTACTCCAGAACTGTTGTGATGCAGTCCACAATAGAGAACCATGTTGATCCAACAGGATGGGCAGAGTGGGATGACAAGAGTAAGGACTTTTTGCAAACTTTGTATTATGCAGAGTACAATAACAGTGGAGCAGGTGCTGGAACCAGCAAGAGAGTGAACTGGCCTGGTTACCATAAGAGCATAACTGCAGCAGAAGCCAACAAGTTCACAGTAAAACAGCTTATCCAAGGAAATGTTTGGTTGAAAAACACCGGGGCACTAGTAAGTATGGCTATCCAAGAATCTCTGCTAGAGAGGCCAAGAAACTCTGCTACCAAAACTATCTGTTTAATCTTCTCTGTAGCTGCTGTCATATGCTCATCAGTCTTTGCTGCTTCTTATTTCATCAAACCCAGTTCCTTCCTTAACCAATCCTCTCCTCAACATCTCTGTCATCATGCACTTGATAACCCATCATGCTTAGCACATCTCTCAGAAGTGGTTCAAGGTCCCATCTTGACCACAACAAAAGACCACAACTTCAATTTGTTCCACTCTTTCTTATTGAAATCCACCTCGCACATTCAGAGAGCCATGAACACAGCTAGTTCCATCAGAATTAGGGTTAACAGTCCCAAGGAGGAAGCAGCTTTGAACGACTGTGTGGAGCTGATGGAGTTATCCATCGACAGAGTTTTGGACTCAATGCTAACTCTAACAAACCAAACCACTGAGTCACAGCAAGACGCGCACACATGGCTAAGTAGCGTGCTCACTAACCATGCAACTTGTTTGGATGGGTTAGAGGGGACAGCTCGAGCACTTATGGAGGCTGAACTTGAGGACTTGATATCCAGAGCAAGAACCGCTCTGGCCATGTTTGTGACTGTTTTGCCCCCGAGAGTTGAACCAATCGTTGATGAGCCACTGAATGGGGAGTTTCCCTCGTGGTTGAGCAGCAAGGATAGGAGGCTTTTGGAGTCCAGTGTTGGGGACATCAACGCCAACGTTGTGGTGGCAAAGGATGGAAGTGGCAAGTTTAAGACTGTGGCTGAGGCTGTGGCATCTGCACCTGATAACAGTAAGACGAGGTATGTTATTTACGTGAAAAAAGGAACATATAAAGAGAATGTTGAAATTGGTACGAAGAAGAAGAACGTGATGCTCGTTGGAGATGGTAAGGATCTAACTATAATTACCGGCAGCTTGAATTACATTGACGGAACGACCACATTTAAGTCTGCAACTGTGGCTGCTGTGGGGGATGGATTTATAGGTCAAGACATATGGTTCCAGAACACTGCAGGCCCACAGAAGCACCAAGCGGTGGCTCTGCGCGTAGGCGCCGACCAATCCGTCATAAACCGTTGTCGCGTAGATGCCTTTCAAGACACTCTCTACGCACACTCCAACAGGCAGTTCTACAGAGACTCTTTTATCACCGGCACCGTTGACTTCATTTTCGGAAACGCCGCCGTCGTCTTCCAAAAGTGCTACTTGGCGGCCCGAAAGCCCATGAGTAACCAAAAAAACATGGTGACGGCTCAGGGAAGAGAAGATCCAAACCAAAACACAGGAACTTCAATTCAACAATGTAACCTAACACCCAGCTCAGATCTTAAGCCTGTTGCGGGTTCCATCAAAACTTTTCTGGGTCGACCTTGGAAGAAGTACTCCAGAACTGTGGTGATGCAGTCCACAATAGAGAACCATATTGACCCAACAGGATGGGCAGAGTGGGATGACAAGAGTAAGGACTTTTTGCAAACGTTGTATTATGCAGAGTACATGAACAATGGAGCAGGTGCTGGAACCAGCAAGAGAGTGAACTGGCCTGGTTACCATAAGACCATAACTACAGCAGAAGCCAACAAGTTCACAGTAAAACAGCTTATCCAAGGAAATGTTTGGTTGAAGAACACCGACAACCCTAGAAAACCCGTTTCCAAAACTATATGCTTAATCCTCTCTGTAGCTGTTGTGCTAACTTCATCAGCTCTCATCGCTTCTTATCTCACAAAACCCACCACCTTATTCAGCCACACCATCTCTCACCATGTCTGCGATCACGCAATTGAGACTTCAGCCTGCTTAGCACATGTCTTAGAAGTGGTACAAGATCCGATCACGCAAAACCACAAGTTCGGCTTGCTCCAGTCTTTTTTAACGAAATTCGCTTCACACATTGAGAGAGCGATGGAGGCAGCGAACGCCACAAGGGTGAGGATGAACAATCCAAGAGAAGAAGCTGCCTTGCGGGATTGCGTGGAGCTCATGGAGTTATCCAAGGAAAGAGTTCGGGACTCAAAGACAAGCCTAGCCAAAGACACCACTGATTCTGTTGAAGATGCACACACTTGGCTCAGCAGCGTGCTCACCAATCATGTAACATGCTTGGATGGATTGGAGGAGCGAGGTGGAAGGGTTATGGAGGAAGAGGTTCGGGACTTGATCTCGCGAGCAAGAACCTCTTTAGCCATGCTTGTTGCTGTTCTGCCTCCAAATCCAAAGGTTGAAGAGATGTCAGAAAATGGGAAGTTTCCGTCATGGGTGAGAAGCAGGGATCGGAAGCTGTTGGAGTCTTGGGCGGGAGAGAATACGGCGAACGTTGTGGTGGCTAAGGACGGGAGTGGTGACTTCAAGACGGTTGCTGAAGCGGTGGCATCAGCACCGGAGAAAAGCAAAAAGAGGTATGTTATTCATGTGAAGAGCGGAACATATAAAGAGAACGTTGAAATCGGTTCAAGAAAGAAGAACGTGATGCTGGTGGGTGACGGCATGAATACAACTATAATCACCGGCAGCTTGAACTTCATCGACGGAACGGGCACCTTCAGAACTGCTACTGTTGCGGCGGTTGGGGATGGGTTCATAGCCCAAGACATTTGGTTTCAAAATACAGCAGGCCCAGAAAAGCACCAGGTAGTGGCTCTTCGCGTGGGCGCTGACGAATCGGTGATAAATCGTTGCCGCGTGGACGCATACCAAGACACTCTCTACGCCCATTCCAACAGACAGTTCTACCGCGACTCCTTCGTTACGGGCACCATTGACTTCATCTTCGGAAACGCTGCTGCTGTGTTCCAGAACTGTAAGCTAGAGGCCCGAAAGCCCATGAGTAGTCAGAAAAACATGGTGACGGCCCAAGGACGAACAGACCCAAACCAGAACACAGGAACTTCAATTCAACAGTGTGAGCTCTCCCCCAGCGCGGATCTCAGGCCCGTCATAGGCTCTTTCAAAACTTATTTGGGCCGCCCGTGGAAGAACTTCTCAAGAACGGTTGTGATGCAATCGTTTTTGGACAAGCACATTGACCCTGAGGGATGGGCCGAATGGGATGAGAAGCATAAAAGCTATTTGAAGACCCTATATTATGGAGAGTACATGAACAAAGGACCAGGAGCTGGTACCAGTGAAAGAGTGAATTGGAGTGGTTACCACATCATCAAAACTGAGGCTGAGGCCAACCACTTCACTGTAAAAACCCTGATCCAAGGTGATGTTTGGTTGAAGAACAGTGGGGTCAACTTCATTGAAGGTCTATAA 4944 0.4717 MMHGQNKALVSMAIQESLLERPRNSATKTICLIFSVAAVICSSVFAASYFIKPSSFLNQSSPQHLCHHALDNPSCLAHLSEVVQGPILTTTKDHNFNLFHSFLLKSTSHIQRAMNTASSIRIRVNSPKEEAALNDCVELMELSIDRVLDSMLTLTNQTTESQQDAHTWLSSVLTNHATCLDGLEGTARALMEAELEDLISRARTTLAMFVTVLPPRVEPIVDEPLNGGFPSWLSSKDRRLLESSVGDINANVVVAKDGSGKFKTVAEAVASAPNNSKTRYVIYVKKGTYKENVEIGQTKKNVMLVGDGKDATVITGSLNVIDGTSTLKSATVAAVGDGFIGQDIWFQNTAGPQKQQAVALRVGADQSVINRCRIDAFQDTLYAHSNRQFYTDSFITGTVDFIFGNAAVVFQKCNLVARKPMSNQKNMVTAQGREDPNQNTGTSIQKCNLTPSSDLKPVVGSIKTFLGRPWKKYSRTVVMQSTIENHVDPTGWAEWDDKSKDFLQTLYYAEYNNSGAGAGTSKRVNWPGYHKSITAAEANKFTVKQLIQGNVWLKNTGALVSMAIQESLLERPRNSATKTICLIFSVAAVICSSVFAASYFIKPSSFLNQSSPQHLCHHALDNPSCLAHLSEVVQGPILTTTKDHNFNLFHSFLLKSTSHIQRAMNTASSIRIRVNSPKEEAALNDCVELMELSIDRVLDSMLTLTNQTTESQQDAHTWLSSVLTNHATCLDGLEGTARALMEAELEDLISRARTALAMFVTVLPPRVEPIVDEPLNGEFPSWLSSKDRRLLESSVGDINANVVVAKDGSGKFKTVAEAVASAPDNSKTRYVIYVKKGTYKENVEIGTKKKNVMLVGDGKDLTIITGSLNYIDGTTTFKSATVAAVGDGFIGQDIWFQNTAGPQKHQAVALRVGADQSVINRCRVDAFQDTLYAHSNRQFYRDSFITGTVDFIFGNAAVVFQKCYLAARKPMSNQKNMVTAQGREDPNQNTGTSIQQCNLTPSSDLKPVAGSIKTFLGRPWKKYSRTVVMQSTIENHIDPTGWAEWDDKSKDFLQTLYYAEYMNNGAGAGTSKRVNWPGYHKTITTAEANKFTVKQLIQGNVWLKNTDNPRKPVSKTICLILSVAVVLTSSALIASYLTKPTTLFSHTISHHVCDHAIETSACLAHVLEVVQDPITQNHKFGLLQSFLTKFASHIERAMEAANATRVRMNNPREEAALRDCVELMELSKERVRDSKTSLAKDTTDSVEDAHTWLSSVLTNHVTCLDGLEERGGRVMEEEVRDLISRARTSLAMLVAVLPPNPKVEEMSENGKFPSWVRSRDRKLLESWAGENTANVVVAKDGSGDFKTVAEAVASAPEKSKKRYVIHVKSGTYKENVEIGSRKKNVMLVGDGMNTTIITGSLNFIDGTGTFRTATVAAVGDGFIAQDIWFQNTAGPEKHQVVALRVGADESVINRCRVDAYQDTLYAHSNRQFYRDSFVTGTIDFIFGNAAAVFQNCKLEARKPMSSQKNMVTAQGRTDPNQNTGTSIQQCELSPSADLRPVIGSFKTYLGRPWKNFSRTVVMQSFLDKHIDPEGWAEWDEKHKSYLKTLYYGEYMNKGPGAGTSERVNWSGYHIIKTEAEANHFTVKTLIQGDVWLKNSGVNFIEGL* 1648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00096 1647 PANTHER PECTINESTERASE 587 1106 - -
Phac2g00096 1647 FunFam Pectinesterase 3 63 212 - -
Phac2g00096 1647 SUPERFAMILY Pectin lyase-like 799 1107 IPR011050 -
Phac2g00096 1647 SUPERFAMILY Pectin lyase-like 249 558 IPR011050 -
Phac2g00096 1647 Gene3D Invertase/pectin methylesterase inhibitor family protein 1149 1296 IPR035513 -
Phac2g00096 1647 Gene3D Invertase/pectin methylesterase inhibitor family protein 613 762 IPR035513 -
Phac2g00096 1647 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 212 IPR035513 -
Phac2g00096 1647 CDD PMEI-like_4 74 212 - -
Phac2g00096 1647 ProSitePatterns Pectinesterase signature 1. 276 295 IPR018040 -
Phac2g00096 1647 FunFam Pectinesterase 245 564 - -
Phac2g00096 1647 CDD PMEI-like_4 1137 1296 - -
Phac2g00096 1647 ProSitePatterns Pectinesterase signature 2. 945 954 IPR033131 -
Phac2g00096 1647 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 208 IPR035513 -
Phac2g00096 1647 SUPERFAMILY Pectin lyase-like 1333 1646 IPR011050 -
Phac2g00096 1647 ProSitePatterns Pectinesterase signature 1. 1359 1378 IPR018040 -
Phac2g00096 1647 Pfam Plant invertase/pectin methylesterase inhibitor 1151 1288 IPR006501 GO:0004857
Phac2g00096 1647 Pfam Plant invertase/pectin methylesterase inhibitor 63 197 IPR006501 GO:0004857
Phac2g00096 1647 Pfam Plant invertase/pectin methylesterase inhibitor 613 756 IPR006501 GO:0004857
Phac2g00096 1647 SMART PMEI_2 607 758 IPR006501 GO:0004857
Phac2g00096 1647 SMART PMEI_2 1144 1292 IPR006501 GO:0004857
Phac2g00096 1647 SMART PMEI_2 57 208 IPR006501 GO:0004857
Phac2g00096 1647 FunFam Pectinesterase 795 1113 - -
Phac2g00096 1647 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 1151 1292 IPR035513 -
Phac2g00096 1647 Pfam Pectinesterase 801 1100 IPR000070 GO:0030599|GO:0042545
Phac2g00096 1647 Pfam Pectinesterase 1334 1633 IPR000070 GO:0030599|GO:0042545
Phac2g00096 1647 Pfam Pectinesterase 251 550 IPR000070 GO:0030599|GO:0042545
Phac2g00096 1647 ProSitePatterns Pectinesterase signature 1. 826 845 IPR018040 -
Phac2g00096 1647 FunFam Pectinesterase 3 613 762 - -
Phac2g00096 1647 ProSitePatterns Pectinesterase signature 2. 1478 1487 IPR033131 -
Phac2g00096 1647 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 614 759 IPR035513 -
Phac2g00096 1647 CDD PMEI-like_4 624 762 - -
Phac2g00096 1647 NCBIfam pectinesterase inhibitor domain 1120 1281 IPR006501 GO:0004857
Phac2g00096 1647 NCBIfam pectinesterase inhibitor domain 37 188 IPR006501 GO:0004857
Phac2g00096 1647 NCBIfam pectinesterase inhibitor domain 587 737 IPR006501 GO:0004857
Phac2g00096 1647 ProSitePatterns Pectinesterase signature 2. 395 404 IPR033131 -
Phac2g00096 1647 Gene3D - 245 564 IPR012334 -
Phac2g00096 1647 Gene3D - 795 1112 IPR012334 -
Phac2g00096 1647 Gene3D - 1329 1647 IPR012334 -
Phac2g00096 1647 FunFam Pectinesterase 1328 1647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00096 Phac-Chr2 486893 501955 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00096 16 557 Carbohydrate Esterase AT1G11580 57.065 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00096 K01051 - gmx:100815836 942.954