Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00085 ATGATTGCAGGAATTACAGTTGTGGTAGGCTTGATCATGGTATTTTTCATTTTAGGACTGTACCTTGTCAGGAATAAAAGACATCGACATGGTAAGAATGAAATAGACAATCATAACATCAGTCTTAGATCACTTCGAGTGGCTACCAATAACTTTTCTGATTTGAATAAGCTTGGACAAGGGGGATTTGGCCCTGTTTACAAGGGGAAACTTTGTGATGGCCAAGAAGTAGCAGTGAAGAGGTTGTCAGCTTGCTCAGAACAAGGCTCAGAGGAATTCATAAACGAGGTTCTTCTGATAATGAAACTTCAACACAAAAATCTTGTAAAGCTTCTTGGATTTTGTGTAGATGGAGAGGAGAAGCTTCTTGTGTATGAATTTTTACCCAATGGTAGTCTTGATGTCGTACTCTTTGATCCAAAGCAACGTGCACGACTAGATTGGAGCAAACGCCTGAATATCATAAATGGAATAGCAAGGGGGATACTTTATCTTCATGAAGATTCTCGACTGAAAGTGATTCATAGAGACCTAAAAGCAAGTAATGTGTTGTTGGACCATGACATGAACGCAAAGATCTCAGACTTTGGAATGGCAAGGATATTTTCAGGAAATGAAGGTGAAGCTAACACTGCTACAATAGTTGGCACATATGGTTATATGGCTCCAGAGTATGCAATGGAGGGATTATATTCCATAAAATCTGATGTGTTTGGGTTTGGTGTGCTATTGCTTGAGATCATTACAGGGAAACGTAACGCGGGTTGCTATCACTCTAAAGCCACTCCTAGCCTTCTATCATATGGAAAGGTGATAGAACTAACAGATCCATTGTTGTGTGATTCATGCCCTGGAGATGAGTTTCTGAGATACATGCAGATTGGACTGCTATGTGTTCAAGAGGATGCATATGATAGGCCAACCATGTCTTCTGTTGTGATGATGCTGAAGAATGAATCAGCTACACTTGCCCATCCACAAAAACCACCTTTCTCTGTAGGGAGATTCAATTCTAATGACCCAGATTCCCAGGAATGCTCACTCAATTTCTTAACCATGTCAGATATATTGCCCCATTCCAGTGAATTCCCACTGTACAACCTCAATAGCTCATTCCATGACAACCTCAACCTTGTTCTGGGGTTGCTTTCCTCCATCAACGCTTCAACGGCTGGTTTCTATACCACGTCTAGAGGACAAGAGCCAAACAGAGTGTATGGACAATCGCTGTGCAGAGGGGACATCACCAACTCCACAGTTTGCAGAGAATGCATTGAGAAAGCAAGCCAAGAGATAATGAACAGTTGCAGGAGTGAAAATGCAATGATATGGTACAACCTTTGCCAAGTGCGCTACTCCTTTCAGAGCTTTGATGTGGTGGCTTATACTGGAAAGTATCCGAAGCAGAATGATGAGGAACAGAATGTCTCTGATCCTGTTCGATTCAGGGAATACTTGACTTTTCTAATGAACAATCTCTCATCCGAGGCTGCTTTCAATCCTGTCAAGAACATGTTTGCGGCTGCTGAAATTGAGTATCCTGGGAAGAAGACAATTTATGGGTTGGTCCAATGTACGAGGGACATGTCCCTCGAAGGCTGCAGTAGTTGTTTGAGTTCTGCCTTCACAGAACTCACTACATGCTGCTCCCACAGAGAAGGTGGGATTATTCTTAGTCGTACTTGCAATATGAGGTTCCAATTGTCTCTGTTCTTCAATGCTTCTTCTGCATATCTCTTGGTTTACCCAACTTCCACAGCACTTGTTATTGGGTTCGGCATTGCATACTTACGAGGAAAGACAAATAGAGACAAAGATGGAGAAATTAGTGAAAGAACGCTATTAGAAGAGCTGACTACACCTAAGCATGTAGCACTCACACGAGAAGGTGACTTGATTAGTTCCGAAGAAGTGTTGTTCATGACTTTAGCTTCCATTAGGGTTGCTACTGATGACTTTTCTGATACAAATAAGCTGGGACAAGGAGGGTTTGGTGCAGTGTACAAGGGTGTTCTGCCAGATGGTAATGAAATAGCAGTTAAGAGATTGTCGAGGAAATCTTGGCAAGGCATAGAGGAATTTAAAAATGAAGTTGTGCTGATTGCCAAACTTCAACACAAGAATTTGGTGAGGCTGTTAGGTTGTGCTCTGGAGGGAGAAGAAAAGTTACTCATATATGAGTTCATGTCAAACAAAAGCCTTGATCAACTTATCTTTGATCCAGAAAAACGTTCAAAACTTGATTGGAAGACATACAATGATATTATCAATGGCATAGCCAGAGGACTACTTTATCTTCACGAGGAGTCACGCCTTAAAATCATTCACAGAGACTTAAAGCCCAACAATGTCTTGTTAGATCACGAACTATTGGCCAAAATATCAGATTTTGGTATGGCCAGAATATTTTCTGAGAACCAGAATGCTGCAAACACCAAAAGAGTGGTGGGAACATATGGATACATGGCTCCAGAGTATGCAATGGAAGGATTGTTCAGTGTGAAATCCGATGTGTTCAGCTTTGGCGTTGTCTTGCTTGAAATCATCAGCGGAAAAAGAAGCAGTGGTTTTTACCAAACCGAACTTGCCCCGACACTGCTGGCATATGCATGGCGAGTGTGGAATGAAGGAAAAGCATTGGACTTTGTGGATTCAGTGGTGTTGGAAACATGCCCTGCAACTGAGGTTGAAAGATGCATTCACATTGGACTTCTGTGCGTGCAGGAAAATCCAGAACATAGACCCACCATGTCAACTGTGATGCTTCTCCTGGGAAGTGAATCAATGGATCTTCCCCAACCAAAACAACCCGCTTTTGCTTTGAGTAAGGTGCTTCATCTCGATCCATCTACGAAAACCAATCCTTCAGATAATGAGATTGTATTTTCTGATATTTTACCTCGCTGA 2907 0.419 MIAGITVVVGLIMVFFILGLYLVRNKRHRHGKNEIDNHNISLRSLRVATNNFSDLNKLGQGGFGPVYKGKLCDGQEVAVKRLSACSEQGSEEFINEVLLIMKLQHKNLVKLLGFCVDGEEKLLVYEFLPNGSLDVVLFDPKQRARLDWSKRLNIINGIARGILYLHEDSRLKVIHRDLKASNVLLDHDMNAKISDFGMARIFSGNEGEANTATIVGTYGYMAPEYAMEGLYSIKSDVFGFGVLLLEIITGKRNAGCYHSKATPSLLSYGKVIELTDPLLCDSCPGDEFLRYMQIGLLCVQEDAYDRPTMSSVVMMLKNESATLAHPQKPPFSVGRFNSNDPDSQECSLNFLTMSDILPHSSEFPLYNLNSSFHDNLNLVLGLLSSINASTAGFYTTSRGQEPNRVYGQSLCRGDITNSTVCRECIEKASQEIMNSCRSENAMIWYNLCQVRYSFQSFDVVAYTGKYPKQNDEEQNVSDPVRFREYLTFLMNNLSSEAAFNPVKNMFAAAEIEYPGKKTIYGLVQCTRDMSLEGCSSCLSSAFTELTTCCSHREGGIILSRTCNMRFQLSLFFNASSAYLLVYPTSTALVIGFGIAYLRGKTNRDKDGEISERTLLEELTTPKHVALTREGDLISSEEVLFMTLASIRVATDDFSDTNKLGQGGFGAVYKGVLPDGNEIAVKRLSRKSWQGIEEFKNEVVLIAKLQHKNLVRLLGCALEGEEKLLIYEFMSNKSLDQLIFDPEKRSKLDWKTYNDIINGIARGLLYLHEESRLKIIHRDLKPNNVLLDHELLAKISDFGMARIFSENQNAANTKRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVVLLEIISGKRSSGFYQTELAPTLLAYAWRVWNEGKALDFVDSVVLETCPATEVERCIHIGLLCVQENPEHRPTMSTVMLLLGSESMDLPQPKQPAFALSKVLHLDPSTKTNPSDNEIVFSDILPR* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00085 968 Gene3D Transferase(Phosphotransferase) domain 1 729 933 - -
Phac2g00085 968 Gene3D Transferase(Phosphotransferase) domain 1 128 328 - -
Phac2g00085 968 FunFam Cysteine-rich receptor-like protein kinase 10 23 127 - -
Phac2g00085 968 CDD STKc_IRAK 58 318 - -
Phac2g00085 968 FunFam Cysteine-rich receptor-like protein kinase 10 617 728 - -
Phac2g00085 968 ProSiteProfiles Protein kinase domain profile. 52 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00085 968 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 368 946 - -
Phac2g00085 968 Pfam Protein tyrosine and serine/threonine kinase 656 921 IPR001245 GO:0004672|GO:0006468
Phac2g00085 968 Pfam Protein tyrosine and serine/threonine kinase 56 315 IPR001245 GO:0004672|GO:0006468
Phac2g00085 968 ProSiteProfiles Gnk2-homologous domain profile. 354 457 IPR002902 -
Phac2g00085 968 SMART serkin_6 52 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00085 968 SMART serkin_6 653 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00085 968 FunFam Uncharacterized protein 729 930 - -
Phac2g00085 968 ProSiteProfiles Protein kinase domain profile. 653 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00085 968 Pfam Salt stress response/antifungal 367 454 IPR002902 -
Phac2g00085 968 Pfam Salt stress response/antifungal 474 567 IPR002902 -
Phac2g00085 968 ProSitePatterns Protein kinases ATP-binding region signature. 659 681 IPR017441 GO:0005524
Phac2g00085 968 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Phac2g00085 968 SUPERFAMILY Protein kinase-like (PK-like) 37 349 IPR011009 -
Phac2g00085 968 Gene3D - 359 457 IPR038408 -
Phac2g00085 968 Gene3D - 465 571 IPR038408 -
Phac2g00085 968 Gene3D Phosphorylase Kinase; domain 1 629 728 - -
Phac2g00085 968 SUPERFAMILY Protein kinase-like (PK-like) 638 941 IPR011009 -
Phac2g00085 968 FunFam Liguleless narrow1 128 324 - -
Phac2g00085 968 FunFam Cysteine-rich receptor-like protein kinase 10 467 571 - -
Phac2g00085 968 CDD STKc_IRAK 659 920 - -
Phac2g00085 968 Gene3D Phosphorylase Kinase; domain 1 21 127 - -
Phac2g00085 968 ProSiteProfiles Gnk2-homologous domain profile. 464 571 IPR002902 -
Phac2g00085 968 ProSitePatterns Serine/Threonine protein kinases active-site signature. 774 786 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00085 Phac-Chr2 414519 426899 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00085 349 941 Receptor kinase-like Gene Family AT4G23230 42.742 1.90e-163 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac2g00085 PK_Tyr_Ser-Thr 4.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00085 - - pcin:129293128 1228.77