Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g04006 ATGAAGGTTAGAGGAGAGAAGAGGAGAGAAGAGGAGAGAGGGATGGAAAAGATAGAGAGAGAGGGAGTGTTGGTGGAAGAGGAAAAGGAAGAAGAAGAAGAAGAAGCCTCAGTAGAGATATGGAAGTACATATTTGGATTTGTGGAAATGGCAGTGGTGAAATGTGCGATAGAGCTTGGGATAGCAGAAGCCATAGAAAAGCATGGAAGGCCGATGACAGTGTCGGAGATATCATCAGCTATAGGCTGTGATCCTTCTCTTCTCAAGCGCATAATGAGGTTCCTGGTGCGCAGAAAGATATTCAAACCCGTCACAAATGGCTATTCACAGACACCTCTGTCTCGGCGTTTGATCAGAGAAGGAAAACAGAGCATGGCCGCTTTACTTCTGCTCGAGAGCAGTCCTGTGATGCTCGCACCATGGCACAGTCTAAGCGCTCGCGTAATGGCCAACGGCCGTCCATCATTTCAAAACACTCACGGCGAAGACGTGTGGCGCTATGCCGCCGCAAATCTGGACCACAGCAACCTCATCAACGAAGGGATGGCATGCGATGCTAAGCTTGTTATGCCTGTCATCGTCCGAAGCTGTAGCGAGGCGTTTGATGGTGTGGAGTCCGTGGTGGACGTGGGTGGGGGGAACGGCAGCGCCATGCGCATCCTCCTTGAGGCTCTCCCTTCCATTCGAGCCATCAATTTCGATCTTCCCCATGTGATTGCCCAAGCCCCTCCCTGCGATGGCCTCCAACACGTGGCAGGAAACATGTTCGAGAGTGTTCCTGAAGCCGACGCTGTTTTTCTCAAGTGGGTTTTGCACGACTGGTCGGACGAAGAGTGCATCGAAATCTTGAAGAAGTGTAGGGAAGGAGTGTCGAAGGAGAAGGGGAGGGTGGTGATCGTGGAGGCGGTGATTGGAGAAGAAGGAGAAGAAGAAGAAGAAGAAGATAGAAAGCTGGCGGACGTAGGAGTTGTTCTGGACATGGTGATGATGGCTCACACTAACTTTGGGAAAGAGCGAACTCTGAAAGAGTGGGAATATGTTATCAAAATGGCAGGCTTTAGCTCATTCACCGTCAAACCGATTCACGCGGTGCAGTCTGTCATTTTGGCTTTCTACTGA 1119 0.5067 MKVRGEKRREEERGMEKIEREGVLVEEEKEEEEEEASVEIWKYIFGFVEMAVVKCAIELGIAEAIEKHGRPMTVSEISSAIGCDPSLLKRIMRFLVRRKIFKPVTNGYSQTPLSRRLIREGKQSMAALLLLESSPVMLAPWHSLSARVMANGRPSFQNTHGEDVWRYAAANLDHSNLINEGMACDAKLVMPVIVRSCSEAFDGVESVVDVGGGNGSAMRILLEALPSIRAINFDLPHVIAQAPPCDGLQHVAGNMFESVPEADAVFLKWVLHDWSDEECIEILKKCREGVSKEKGRVVIVEAVIGEEGEEEEEEDRKLADVGVVLDMVMMAHTNFGKERTLKEWEYVIKMAGFSSFTVKPIHAVQSVILAFY* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g04006 372 Gene3D Vaccinia Virus protein VP39 119 371 IPR029063 -
Phac1g04006 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 41 372 IPR016461 GO:0008168
Phac1g04006 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 369 IPR029063 -
Phac1g04006 372 PANTHER O-METHYLTRANSFERASE 50 356 IPR016461 GO:0008168
Phac1g04006 372 FunFam O-methyltransferase family protein 119 371 - -
Phac1g04006 372 Gene3D - 23 117 IPR036388 -
Phac1g04006 372 FunFam O-methyltransferase family protein 25 117 - -
Phac1g04006 372 Pfam O-methyltransferase domain 141 354 IPR001077 GO:0008171
Phac1g04006 372 Coils Coil 15 35 - -
Phac1g04006 372 Pfam Dimerisation domain 52 96 IPR012967 GO:0046983
Phac1g04006 372 SUPERFAMILY "Winged helix" DNA-binding domain 30 120 IPR036390 -
Phac1g04006 372 PIRSF O-mtase 19 372 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g04006 Phac-Chr1 43731035 43732784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g04006 33 358 Monolignol Biosynthesis Gene Families AT5G54160 34.311 2.15e-63 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g04006 K22588 - gmx:100782951 502.671