Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03978 ATGAAGATAAATGCAAATGAAACGATGTTCCTATCAATTACAGAAGTGGATGAAATGAACCAGAGGTACCTGGTATGCCTTGATGCGCCACCCCACATTGTTTCAGATGGGTTATGGCGTGGCAGCTCACAAAATACAAGGACTCCAATCAGATCTTTTCTCCCCTTGTTTGAGTTACAAGTCCTTCTAATATTTGCCCTCACCCAAATCTGCCGGCTCCTCCTCATGCCCTTCAAAGTCCCTCTCTTTATTTCCCAGATGATGGCTGGGTTAATTCTGCAGGCTCTTTTTGCTGGGGAACCATTGGGGTCGTACATGAGGGTGCTGTTTCCTTATGGAACTCACGACACGATCACAACAGTAACATCGATGGGTTTTGTGCTTTTCATCTTCATAAACGGTGTGCAGATGGATTTTAGCTTGATAACAAGGATGGGAAAGAGGGCATGGACCATTGCCATTATGGGATTGGTAGTGCCCATATTCACCGCCATATCAATCCTGGCCGTGTTCAAATATCCACTGCTTGATGCTGTCAAAGATAACTACGACCATTTCGTTGTTGCATTGGTCTCCCACACTATTATTTCATTTGCCGTCATTGCTTCCCTTCTCAATGAACTTCAAATCCAGAACTCCGAACTTGGCAAATTGGCATTGTCTGCCGCATTGGTCAGTGACGTATTGTGCACCTTCGCTACCACCGTAGGCACTCTTTTTATGTTCTGTGAGGGTGGTTCAGAAGAGATTATTAAAAACCTCTTCGGTTTGTTTGCAATGGGTATATTTGTTCCATTAGTGTGTCGCCCAGTAATGTTTTGGATCATCAGAAACACTCCAGAAGGAAGACCTGTGAAAGATGGTTACGTTTACGTTATCATCGTGCTGCTCTTCGTGTTAGGTTGGGCTTCGGTTAAAATAAACCAAGAATTCGTGCTTGGAGCTTTCATTCTGGGATTGGCCGTGCCGGAGGGACCTCCACTAGGATCTGCATTGGTCAAGAAGCTTAACTTCTTTGGTACCACCTTCCTTTTGCCAATCTTCATCACTATCTGCATGCTCAAAGCAGATTTTTCCTCCACTTATTCCTCCGCTTCAGTTTTCACTGTCTGTCTCGTCATCATCCTCACCCACTTGGTCAAAATTATAGCCTGCACTCTACCCGCCCTCTACAGCAACATGCCCTTCCGTGATGCTCTCGCTCTCTCCCTCATTTTGAACTCCAAAGGCGTTGTGGAAATCGGACTCTACTGCTTCTTATACGACTACAAGATAATCGATGGGCTAACATACGGAATAATGATTCTGAGCATAATCGTGGTAGCATGTACGGTGCAATGGTCTGTGAGGTTTTTGTACGACCCTTCAAGAAAATACGCAGGGTACCAAAAAAGGAACATCATGAATTTAAGAGCTTGGTCTGAGCTGAGAATGCTGGTGTGCATTCACAAGCCAAACCAGATATCGTCGATGATAGATATGGTCGACCTGTGTTGTCCAACGGCAGAAACTCCAATCGCAGTGGATGCGTTGCATCTAGTAGAGCTGGTGGGGCGTGCCTTGCCAATTTTCATCCCCCATCGTATTCAAAGGCAAGAATCAGGGATTCAGCACAGGTCATACTCAGATGATGTAATCCTTGCTTTCAACATTTACGAGCACGAGAACCCTGGTGCGGTGTCGGCGTACCCCTGCACCGCAGTGTCGCCACCGAACCTGATGTACGAAGACGTTTGCAACCTTGCCTTTGACAAGGTGGCGTCCATAATAATTCTTCCGTTTCATCAGAGATGGTCGGTGGATGGGGAATTGGAAATGGACGAGAAGAGCATAAGGGCACTGAATTGCAGGGTCCTGGAAATAGCTCCATGCTCGGTTGGAATCCTGGTGTCGAGAGCTTGGCAGAGAATGAGAGAGGAGACGTCAATTCGATTGGGGCTGATATATTTGGGGGGAGAGGACGACGAGGAGGCGCTGTGCATAGCGAAGAGAGCGATGATGAAGAAGGGGATGAAGCTTGCGGTGTATCACCTGGTGTACGAGGCGGAGAAGGATTGGGATGAAAGGGCGGAAGAGCTGGAAGAAATGAAGAATAGGCATGAAAATAACATTAGGTATCAACAGATAGTGGCAAAGGAAGGATCTCAGACGGCGGCGTTCCTGAACGAGGTGGCGAAAGAGCATGACTTCTTCATCGTGGGGAGGAGGCATGGGATTGATTCCCCTCAGACGCAGGGACTCACAAACTGGAGCGAATTCCCAGAGTTAGGTGTCATCGGTGACTTTCTTGCCTCGCCGGATTTGGAGAGCCGTGCATCCATTTTGGTGGTGCAGCAACAATTCGCACCCAAGCCCCGCAAAGGCTGGTTATTTTAG 2376 0.4739 MKINANETMFLSITEVDEMNQRYLVCLDAPPHIVSDGLWRGSSQNTRTPIRSFLPLFELQVLLIFALTQICRLLLMPFKVPLFISQMMAGLILQALFAGEPLGSYMRVLFPYGTHDTITTVTSMGFVLFIFINGVQMDFSLITRMGKRAWTIAIMGLVVPIFTAISILAVFKYPLLDAVKDNYDHFVVALVSHTIISFAVIASLLNELQIQNSELGKLALSAALVSDVLCTFATTVGTLFMFCEGGSEEIIKNLFGLFAMGIFVPLVCRPVMFWIIRNTPEGRPVKDGYVYVIIVLLFVLGWASVKINQEFVLGAFILGLAVPEGPPLGSALVKKLNFFGTTFLLPIFITICMLKADFSSTYSSASVFTVCLVIILTHLVKIIACTLPALYSNMPFRDALALSLILNSKGVVEIGLYCFLYDYKIIDGLTYGIMILSIIVVACTVQWSVRFLYDPSRKYAGYQKRNIMNLRAWSELRMLVCIHKPNQISSMIDMVDLCCPTAETPIAVDALHLVELVGRALPIFIPHRIQRQESGIQHRSYSDDVILAFNIYEHENPGAVSAYPCTAVSPPNLMYEDVCNLAFDKVASIIILPFHQRWSVDGELEMDEKSIRALNCRVLEIAPCSVGILVSRAWQRMREETSIRLGLIYLGGEDDEEALCIAKRAMMKKGMKLAVYHLVYEAEKDWDERAEELEEMKNRHENNIRYQQIVAKEGSQTAAFLNEVAKEHDFFIVGRRHGIDSPQTQGLTNWSEFPELGVIGDFLASPDLESRASILVVQQQFAPKPRKGWLF* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03978 791 Gene3D - 57 460 IPR038770 -
Phac1g03978 791 Coils Coil 683 703 - -
Phac1g03978 791 PANTHER CATION/H + ANTIPORTER 36 780 - -
Phac1g03978 791 Pfam Sodium/hydrogen exchanger family 62 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03978 Phac-Chr1 43516274 43519153 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03978 17 780 Antiporter Super Family AT5G22900 35.086 2.10e-149 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03978 K26731 - gmx:100785062 1180.24