LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac1g03932	ATGGGAAGAGGAAGAGTGGAGTTGAAGAGAATTGAGAACAAGATCAACAGGCAAGTGACCTTTGCAAAACGAAGGAACGGGCTTTTGAAGAAAGCTTATGAGCTTTCCGTTCTTTGTGATGCAGAGCTTGCTCTCATCATCTTCTCCACTAGAGGAAAGTTGTACGAGTTTTGCAGCACTTCAAGCATGCTGAAAACTTTAGAGAGGTACCAGAAATGTAACTATGGAGCGCCCGAGGCCAATGCATCAACAAAGGAAGCCTTGGTATTGGAGTTAAGCAGTCAACAAGAATATTTGAAGCTGAAGGCACGGTATGAAGCTCTACAACGTTTTCAAAGGAACCTTATGGGAGAAGATCTTGGCCCTCTAAGCAGCAATGAGCTTGAATCACTTGAAAGACAGCTAGATTCGTCGTTGAAGCAAATCAGATCAACAAGGACCCAATTCATGCTGGATCAGCTTTCTGATAGTCAACGCAAGGAACACTTGCTAGGTGAGGCAAACACAGCTCTCAGACAAAGGTTGGAAGAGTATCAAATAAATCAATTTCAACTGAATCCCAGTGGTGAAGATATGGGGTATGACCGTCATCCAGGTCAACACCAAGGCGATGCTCTCTTTCAACCATTGGAGTGTGAACCAACATTACAAATGGGGTATCAATTTCCTCTTCATTAA	678	0.4336	MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSTRGKLYEFCSTSSMLKTLERYQKCNYGAPEANASTKEALVLELSSQQEYLKLKARYEALQRFQRNLMGEDLGPLSSNELESLERQLDSSLKQIRSTRTQFMLDQLSDSQRKEHLLGEANTALRQRLEEYQINQFQLNPSGEDMGYDRHPGQHQGDALFQPLECEPTLQMGYQFPLH*	226

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Phac1g03932	225	CDD	MADS_MEF2_like	2	76	IPR033896	GO:0000977\|GO:0045944
Phac1g03932	225	ProSiteProfiles	MADS-box domain profile.	1	61	IPR002100	GO:0003677\|GO:0046983
Phac1g03932	225	Coils	Coil	128	148	-	-
Phac1g03932	225	Gene3D	-	13	98	IPR036879	GO:0003677\|GO:0046983
Phac1g03932	225	ProSiteProfiles	K-box domain profile.	91	181	IPR002487	GO:0003700\|GO:0005634\|GO:0006355
Phac1g03932	225	PANTHER	SERUM RESPONSE FACTOR HOMOLOG	3	169	-	-
Phac1g03932	225	ProSitePatterns	MADS-box domain signature.	3	57	IPR002100	GO:0003677\|GO:0046983
Phac1g03932	225	SMART	madsneu2	1	60	IPR002100	GO:0003677\|GO:0046983
Phac1g03932	225	Pfam	SRF-type transcription factor (DNA-binding and dimerisation domain)	10	57	IPR002100	GO:0003677\|GO:0046983
Phac1g03932	225	SUPERFAMILY	SRF-like	2	75	IPR036879	GO:0003677\|GO:0046983

Showing 1 to 10 of 15 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac1g03932	Phac-Chr1	43253317	43258899	Tandem

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac1g03932	1	221	MADS-box Gene Family	AT1G24260	72.768	1.51e-105	302

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MADS-MIKC	Phac1g03932		K-box	1.6e-25	No_clan

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac1g03932	-		-	gmx:547686	385.185

Showing 1 to 1 of 1 entries