Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03882 ATGATGGTGCTGGCGAATTCTGGTTCGGGCCTTCGGAAACAGGTTTTTCCGGTGGATTACGAAACGGAACTGTCGCAGCGTCTCGTAGACGCGGCTTATTACGGCGACACCGACGCTGCTGTTGATTGCGTCGCCAATCCCTCGGTCGACGTTAACTTCGTCGGAACGGTATCGTTTAAGTCTAAAACGACGGAGATCGTGCTGCAGGACGAGTCGCCTCACCAAGTTAACTCGGCGTATGAGGAGTTCAAGACCGACCTCACCGCTCTGTTCCTGGCCGCGCACACAGGGAATTTGACACTCCTTCGGAAGCTTCTGAATGTTGGAGCTAATGTAAATATGAGAATGTTCCGGGGCTATGCCACAACAGCATCAGTGAGAGAAGGGCATCTAAAAGTGTTGGAGGTTCTTCTCAATGCTGGGGCATCACAACTTGCATGCGAAGAGGCTTTAATGGAAGCAAGCTATTTGGGGAGGGGCAGATTTGTTGAATTACTCATGCAATCCAACATGATTCGTCCTCAGGTTGCAGTTCATGCCCTTGTCTCTGCTTGTTGCAGAGGCTTCGTTGAGGTTGTTGATGTACTCATCAAGCATGGAGTGGATGCCAATGCATTTGATAGGACTTTGCTTCAATCTTCAAAGCCATTTCTTCATGCTAATGTTGATTGCAATGCATTATTTGCTGCTGTGGTCAGCAGGCAGATTGATGTTGTTAGATTACTGTTGCAGGTTGGCGTAAGGCTTGACATGAAGGTGAAACTGGGGGCTTGGTCCTGGGACACAGACACAGGAGAAGAATTTCGTGTAGGTGTTGGACTAGCTGAGGCCTATCCAATCACCTGGTGTGCTGTGGAGTATTTTGAATCCACTGGTACTATATTGCATATGCTGCTCTGCCATCTCTCACCTAATACCTTACACAATGGGAGGAGTCTCTTGCACCATGCTATCATTTGCAACAACGAAAAAGCTGTAAATATACTTCTAAACAATGGTGCTGATGCAGAAGTGATGGTGCAAACCACTGAAGGAACCAATGAATACCCTATTCACATTGCTGCACGGCTTGGATCATGCAACATTCTTCAGTGCCTGATTAAAGGTGGTTGCAACTTGGATTCCCGAACAAAATGTGGAGATTCAGCACTGATGATCTGCACAAGGCACAAACATGAGAAGTGCCTTGGGGTCCTAGCATCAGCAGGTGCTGATCTGGGAATGGTAAATTCATCAGGTCACTGTGCAACTTCAATTGCAAACTTTGTTCAGTGGACCAAAGTCTACCAGAAAGTGATTTTGGATGTAATCAGAGCCGGGAAGGTTGTTAAATCAAGCAATGCTGCTAGATTCTCCGCTTTGTTATTTGCAACTCGTGCAAATGACATAGAGGGTTTGAAGAAACTCATTGAAAACGAAAACATCAATCTGAATGAGCAAAATGGCAACGGATTTTCTGCTGCTATGATAGCTGCTGTAGTGGGCAACGTGGAGGCTTTCAAGTTGCTTCTTTATGCAGGTGCTGACATGACTAAGCTTAAAAACAAATATGGTTTGACAGTGCTTAACGTGGTAGATGTGAGCCAAAACAGTGAAGTGTTCCACAAGGTGATGCTTGAATATGCACTTAAAAGTGGTGGAGGCGATGGTTCAACTGAAGCAAACCCTCTCCACCGTGCATGTTGCTATGGAGACACAAGTATTGTTCAGAAACTACTAAAAGAAGGGTATGAAGTAAATGGTTTTGATGGTGAAGGACACACCCCTCTGATGTTAGCAGCAAGAGCATGCCGTGGTGAAATGTGTGAGCTTTTGATCTCACATGGAGCTAAATGTGATGTTCAAAACGAGAGACACGAGACACCCCTTTCACTTTCCAGAGAAAATGGTGCAGGAAATGATGCAGAACGTGTGATTTTGGATGAGCTAGCTAGAACACTGGTCTTGCGTGGAGCTCGTGTGAAGAAGCATACAAAGTGTGGCAAAGGTTCACCTCATGGTAAGTTACTTCAGATGATTGGTGCTGCTGGAGTCTTACGTTGGGGAAAATCAAGTAAGAGAAATGTGATTTGTAAAGAGGCTGAGGTTGGAGCAAGTGTGAAATTTCGATGGAATCGTAGGAGGAAGTTTGATGTTGAAGAACCAGGGTTGTTCCATGTTGTTACTACAACAAAAGACAAAGAGGTACATTTTGTGTGTGATGGTGGTGTTGAAATGGCTGAGTTGTGGGTGAGGGGGATTAAATTAGTAACCAGAGAAGCCATTTCTGGTAGAAGAGCTCATAACCTTTGA 2292 0.4533 MMVLANSGSGLRKQVFPVDYETELSQRLVDAAYYGDTDAAVDCVANPSVDVNFVGTVSFKSKTTEIVLQDESPHQVNSAYEEFKTDLTALFLAAHTGNLTLLRKLLNVGANVNMRMFRGYATTASVREGHLKVLEVLLNAGASQLACEEALMEASYLGRGRFVELLMQSNMIRPQVAVHALVSACCRGFVEVVDVLIKHGVDANAFDRTLLQSSKPFLHANVDCNALFAAVVSRQIDVVRLLLQVGVRLDMKVKLGAWSWDTDTGEEFRVGVGLAEAYPITWCAVEYFESTGTILHMLLCHLSPNTLHNGRSLLHHAIICNNEKAVNILLNNGADAEVMVQTTEGTNEYPIHIAARLGSCNILQCLIKGGCNLDSRTKCGDSALMICTRHKHEKCLGVLASAGADLGMVNSSGHCATSIANFVQWTKVYQKVILDVIRAGKVVKSSNAARFSALLFATRANDIEGLKKLIENENINLNEQNGNGFSAAMIAAVVGNVEAFKLLLYAGADMTKLKNKYGLTVLNVVDVSQNSEVFHKVMLEYALKSGGGDGSTEANPLHRACCYGDTSIVQKLLKEGYEVNGFDGEGHTPLMLAARACRGEMCELLISHGAKCDVQNERHETPLSLSRENGAGNDAERVILDELARTLVLRGARVKKHTKCGKGSPHGKLLQMIGAAGVLRWGKSSKRNVICKEAEVGASVKFRWNRRRKFDVEEPGLFHVVTTTKDKEVHFVCDGGVEMAELWVRGIKLVTREAISGRRAHNL* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03882 763 Coils Coil 460 483 - -
Phac1g03882 763 ProSiteProfiles Ankyrin repeat region circular profile. 585 617 - -
Phac1g03882 763 ProSiteProfiles Ankyrin repeat region circular profile. 309 338 - -
Phac1g03882 763 Gene3D - 303 430 IPR036770 -
Phac1g03882 763 ProSiteProfiles Ankyrin repeat region circular profile. 552 580 - -
Phac1g03882 763 ProSiteProfiles Ankyrin repeat region circular profile. 85 115 - -
Phac1g03882 763 ProSiteProfiles Ankyrin repeat profile. 585 617 IPR002110 GO:0005515
Phac1g03882 763 ProSiteProfiles Ankyrin repeat profile. 346 378 IPR002110 GO:0005515
Phac1g03882 763 ProSiteProfiles Ankyrin repeat profile. 552 584 IPR002110 GO:0005515
Phac1g03882 763 Pfam Ankyrin repeat 309 336 IPR002110 GO:0005515
Phac1g03882 763 Pfam Ankyrin repeat 347 374 IPR002110 GO:0005515
Phac1g03882 763 PANTHER ANKYRIN REPEAT-CONTAINING 22 744 - -
Phac1g03882 763 Pfam Ankyrin repeats (3 copies) 540 616 IPR002110 GO:0005515
Phac1g03882 763 ProSiteProfiles Ankyrin repeat profile. 483 515 IPR002110 GO:0005515
Phac1g03882 763 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Phac1g03882 763 Gene3D - 543 672 IPR036770 -
Phac1g03882 763 Gene3D - 431 542 IPR036770 -
Phac1g03882 763 Gene3D - 178 260 IPR036770 -
Phac1g03882 763 Gene3D - 17 177 IPR036770 -
Phac1g03882 763 SMART ANK_2a 222 251 IPR002110 GO:0005515
Phac1g03882 763 SMART ANK_2a 176 205 IPR002110 GO:0005515
Phac1g03882 763 SMART ANK_2a 379 408 IPR002110 GO:0005515
Phac1g03882 763 SMART ANK_2a 449 479 IPR002110 GO:0005515
Phac1g03882 763 SMART ANK_2a 483 512 IPR002110 GO:0005515
Phac1g03882 763 SMART ANK_2a 585 614 IPR002110 GO:0005515
Phac1g03882 763 SMART ANK_2a 117 146 IPR002110 GO:0005515
Phac1g03882 763 SMART ANK_2a 346 375 IPR002110 GO:0005515
Phac1g03882 763 SMART ANK_2a 552 581 IPR002110 GO:0005515
Phac1g03882 763 SMART ANK_2a 85 114 IPR002110 GO:0005515
Phac1g03882 763 SMART ANK_2a 309 338 IPR002110 GO:0005515
Phac1g03882 763 SUPERFAMILY Ankyrin repeat 28 256 IPR036770 -
Phac1g03882 763 SUPERFAMILY Ankyrin repeat 308 638 IPR036770 -
Phac1g03882 763 ProSiteProfiles Ankyrin repeat profile. 309 341 IPR002110 GO:0005515
Phac1g03882 763 ProSiteProfiles Ankyrin repeat region circular profile. 483 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03882 Phac-Chr1 43050582 43055538 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03882 334 535 Ion Channels AT2G25600 26.667 6.58e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03882 - - gmx:100795638 1313.52