Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03855 ATGTATTTGTCGGAGAAGCCGCGCCCAATCGACTTCTACAAGGAGGAAGGCGCGCGCGACATGATGATCGAGGTGGTCTCCAACGGCGACCTCCCGCCGCCGCCGCCGCACCACCCGCCGCCGATGATCCTCGGCGAGAGCAGCGGAGAGGACCCCGAGGTGGAGATCAAAGCCCCCAAGAAACGGGCGGAGACGTGGGTGCAGGACGAGACGCGCTCGCTCATTGGCCTCCGCCGCGAGATGGACGCGCTCTTCAACACTTCCAAGTCCAACAAGCACCTCTGGGAGCAGATATCCGCCAAGATGAGGGAGAAGGGTTTCGATCGGTCTCCCACCATGTGCACCGATAAGTGGCGCAACCTACTCAAGGAGTTCAAGAAGGCCAAGCACCAGGACCGTGGAGGGAGCGGCTCTGCCAAGATGTCGTATTACAAGGAGATTGATGAGATCCTCAGAGAGAGGAGCAAGAATGTGCAGTACAAGAGCCCCACTCCTCCGCCGAAGGTTGATTCTTTCATGCAGTTTGCTGATAAAGGTATTGATGATACTAGCATCTCTTTTGGACCTGTAGAAGCTACTGGAAGACCAACACTCAATCTTGAGAGAAGTTTGGATCATGATGGACATCCTCTTGCCATTACCACAGCTGATGCTGTTGCAGCTAGTGGAGTCCCTCCTTGGAATTGGAGAGAGACTTCTGGAAATGGTGGAGAAAGTCAGTCATGTTGTGGAAGGGTTATATCAGTTAAATGGGGTGATTATACAAGACGAATAGGTATTGATGGCACTCCAGAAGCCATCAAAGAGGCAATCAGGGCTGCTTTTAGGTTGCGAACTAAGCGCACATTTTGGTTGGAGGATGAAGACCAGATTATCCGAAGTATTGACCGTGAAATGCCTATAGGAAGTTACACTCTTCACCTTGATGAAGGAATGGCCATTAAATTATGTCTGTATGATGAGTCGGAGCATCTTCCTGTGCATACTGAAGACAAGGTATTTTACACTGAAAATGATTACCGTGATTTTCTGACCCGGCGGGGTTGGGTATGTCTAAGAGAATTTGACGGATATAGAAATATTGACAACTTGGATGATCTTCGACCTGGTGCCATATATCGTGGTGTGAGTTGA 1134 0.5053 MYLSEKPRPIDFYKEEGARDMMIEVVSNGDLPPPPPHHPPPMILGESSGEDPEVEIKAPKKRAETWVQDETRSLIGLRREMDALFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGGSGSAKMSYYKEIDEILRERSKNVQYKSPTPPPKVDSFMQFADKGIDDTSISFGPVEATGRPTLNLERSLDHDGHPLAITTADAVAASGVPPWNWRETSGNGGESQSCCGRVISVKWGDYTRRIGIDGTPEAIKEAIRAAFRLRTKRTFWLEDEDQIIRSIDREMPIGSYTLHLDEGMAIKLCLYDESEHLPVHTEDKVFYTENDYRDFLTRRGWVCLREFDGYRNIDNLDDLRPGAIYRGVS* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03855 377 SMART sant 62 124 IPR001005 -
Phac1g03855 377 Gene3D - 66 128 - -
Phac1g03855 377 MobiDBLite consensus disorder prediction 26 53 - -
Phac1g03855 377 CDD GT1 64 129 - -
Phac1g03855 377 ProSiteProfiles Myb-like domain profile. 58 122 IPR001005 -
Phac1g03855 377 PANTHER FI21293P1 46 351 - -
Phac1g03855 377 FunFam trihelix transcription factor GT-1 66 128 - -
Phac1g03855 377 Pfam Myb/SANT-like DNA-binding domain 65 150 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03855 Phac-Chr1 42948707 42953139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03855 20 376 Trihelix Transcription Factor Family AT3G25990 69.672 0.0 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac1g03855 Myb_DNA-bind_4 1.9e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03855 - - ccaj:109807736 745.347