Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03828 ATGGCAGCTCTGTTACCTTACGCGCCCAACATAGTCTCTGCTCCGTTCGGGAACCGGACCGCCACGCGCCTCCCCAACCGTCCTCACTCCCACGCTTTCGCCGCTTCGACCAGACACTTTCTTCGCGGTTCTCTCTCCGTCGCCCGGTTCGGCTTCAAACCCGGTTTCTTGCCCGAGCCGGAGGACGCTGAAGGCTTGCTCAGAGAACTGTTTGGCCGAGCGGAGGGACTTCTTTACACGATTGCGGACGCCGCCGTTTCTTCTTCCGACACGGTTGCGGCTTCCGCCGCCGCCAAACAGAACAACGACTGGCTTTCCGGAATAACCAATTACATGGAGACGGTTCTCAAGGTACTCAAGGATGGGCTTTCTGCTTTGCATGTCCCATATGCTTATGGTTTTGCAATTATACTGCTCACAGTTCTTGTAAAAGCTGCCACTTTTCCTCTAACCAAAAAACAGGTGGAGTCCTCCTTAGCTATGCGAACTTTGCAACCTCAAATAAAGGCTATCCAGGAGCGGTATGCTGGCGATCCGGAGAGAATTCAACTTGAAACTGCTAGATTGTATAAACTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCCACACTCGCAACAATACCAGTGTGGATTGGGCTATATCGAGCCCTTTCAAATGTAGCAGATGAGGGACTCCTTACTGAAGGCTTCTTTTGGATACCTTCTCTTGCTGGTCCAACTACAATCGCAGCTCGTCAAGATGGCAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTCTCCCTCCCCTTGGATGGTCAGATACATTGGCTTACCTTGTCTTACCGGTGTTGCTGGTCGTCTCTCAGTACATATCTGTCCAAATAATGCAGTCATCACAGCCTAATGATCCCAACATGAAAAGTTCTCAAGTCTTGACCAAGTTCCTTCCATTAATGATTGGTTACTTTTCTCTCTCAGTTCCTTCTGGTCTCAGCCTTTACTGGTTAACAAATAATATATTGAGCACTGCACAACAAGTATGGCTTCAAAAGTTAGGAGGTGCCAAAAATCCTGTGAGGCAAGTCCCAGATGATATCATAAAGAATGACCTAACCCAGGTTCAGAAGTCAATATCTAAACTAAATTCCACAATTCCAAAAGAAGCCAGACAAAGTGAGAAAACATCTGAGGGGCCACGAGCTGGTGATAGATTTAAGCAATTAAAGGAGCAAGAGGCAAGGAGAAGACAACAAAGAGAAGAAGAAAAAAGTAAAGGCATGGAAACAGCAGCTAGAGATACCAAAGTAGATGAGAGTCACGAGACACTTAAGAAAACTGGAAGTGATTTAAGTGTTGAAAAATCTCTGTCTGTGGGTTCAGATACCGATCCCTCCATATCTGGAGTAGTAAATGGTAACGTATTAAGTACAGACTTGGAGGAAAATCAGAATTCTACATCTGCATCTGAGACAGAAAATAATGAAGGCTCTACTCATTTCAACAATGCTGAGATAAACGAGAAAAATTCAGACAAGGAACCAAGAGAAGTATTAACATCTACAACCACCACAAACAGACAACCTCCTGCAGAAGATGCAGATCGCATGACAAAGGATTGA 1605 0.4586 MAALLPYAPNIVSAPFGNRTATRLPNRPHSHAFAASTRHFLRGSLSVARFGFKPGFLPEPEDAEGLLRELFGRAEGLLYTIADAAVSSSDTVAASAAAKQNNDWLSGITNYMETVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESSLAMRTLQPQIKAIQERYAGDPERIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQDGSGISWLFPFVDGLPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQPNDPNMKSSQVLTKFLPLMIGYFSLSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVRQVPDDIIKNDLTQVQKSISKLNSTIPKEARQSEKTSEGPRAGDRFKQLKEQEARRRQQREEEKSKGMETAARDTKVDESHETLKKTGSDLSVEKSLSVGSDTDPSISGVVNGNVLSTDLEENQNSTSASETENNEGSTHFNNAEINEKNSDKEPREVLTSTTTTNRQPPAEDADRMTKD* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03828 534 CDD 5TM_YidC_Alb3 133 346 IPR047196 -
Phac1g03828 534 MobiDBLite consensus disorder prediction 444 499 - -
Phac1g03828 534 MobiDBLite consensus disorder prediction 385 443 - -
Phac1g03828 534 MobiDBLite consensus disorder prediction 375 534 - -
Phac1g03828 534 MobiDBLite consensus disorder prediction 511 525 - -
Phac1g03828 534 PANTHER OXA1 82 411 IPR001708 GO:0016020|GO:0032977
Phac1g03828 534 Pfam 60Kd inner membrane protein 132 346 IPR028055 -
Phac1g03828 534 NCBIfam membrane protein insertase YidC 132 346 IPR028055 -
Phac1g03828 534 CDD UDM1_RNF168_RNF169-like 370 427 - -
Phac1g03828 534 Coils Coil 400 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03828 Phac-Chr1 42830297 42835941 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03828 70 418 Chloroplast and Mitochondria Gene Families AT2G28800 56.410 6.16e-131 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03828 K03217 - gmx:100802546 849.351