Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03800 ATGTTAGGGGAAGAGGGGAAGGAGAAAGCCACCGGTGGTAGCGGTGTTGCATGGAAAATCTACTCTCGTTCGGTTTCATGGTCTGATAGGTCTCCTCACAGTCGAAAGCCACCGACAAATAGCAAAGCAAGACCACTATTGCCACCCCTTCAGCCTCTTTCGATCAACAAGCGCAACGTGGAGGAATGGCCTAGTGCCGGATCTGATGATCTTGGAGTTTGGCCACTTCCTCAGACTCCTAGAGGCTCTGTCAGAGCCAATGATTCAAGTCAACCCACCCAGGATTTTCTGTTCAAGAGGGAGAAATTGGCCTTCTTTGACAAGGAGTGTTCCAGAATTGCTGAGCATATATACTTGGGGAGTGACACAGTGGCCAAGAACCATGAACTCCTCAGGAAAAATGGAATCACTCATGTGCTCAACTGTGTGGGGTTTGTTTGTCCTGAGTATTTCAAAGGTGATTTTGTGTACAGGACACTTTGGTTGCAGGATAGCCCCACGGAGGACATCACATGTATTCTCTATGATGTGTTTGATTACTTTGAGGACGTTCGAGAGCAAGGTGGGCGTGTTCTTGTCCATTGCTGTCAGGGGGTTTCTCGATCAACGACTTTGGTAATTGCTTATCTCATGTGGAGGGAGGGGCAGAGCTTTGAAGATGCTTTTCAGTTTGTGAAGATTGCAAGGGCTGTGACCAACCCAAACATGGGTTTTGCCAGTCAACTTTTGCAGTGCCAGAAACGGGTCCATGCTATGCCTGCAAGTCCAAATTCTATTCTCAGGATGTACCGGATGACTCCTCATTCCCCCTATGACCCTCTTCATCTGGTCCCCAAGTTGGTAAACCAGCCAGGTGCACGAGCACTTGACTCTCGTGGGGCCTTCATTGTTCATATTCCTTCTGCTATCTATGTTTGGAATGGGAAACATTGTAGCTCAGTGATGTCATGCTATGCAAGGAGTGCAGCCTTTCAGGTGATCCGTTATGAGAAGGCAAAGGGTCCAATTCTGAGCATCCATGAAGATGAAGAACCACCTGGGTTTTGGATTGCTCTTTCTGATGAGCAACGCGTATCTGGTGATTCTGACAAAGGTGGGGTCATGGAGGAAGAACCAGTGTTGCCCTCTGATGACATGGGGAGAAAAGTTTGTGCATATGATTTGGATTTTGAGATTTTCCACAAGGCACTTGCTGGTGGGGTTGTTCCACCTTTTTCCTTGTCTGATCCAGGATCGGAAACTTGTCTTCCTGCTAGAGAACATGGTTGGGCAAGACTGAGGCGGAAGTTCGCTAGTGGATTACTCACATCCCCCAGATTGGCCAGTGAAGCTGATTCAACCCCATGCAATGATCAATCCAGTGTAATTGTGGAAGCTGAAAACCAACATGCTGCAGATGAGCCTTTGTCACCATCATCTATACATCCCTGTGGCTCACCAGATTCCTTTGAATGCTATCCAAATAGCAGCTTAGGTAGGGAAAAAGATAGTCATGAAGCCATGGATTTCTCTGTTCATGGTGTTTCTTCATCATTACCCTTGTCTCCTCCTGGCACATCAAATCCCTTTCCTTGTTTTATAAGCTGCAGCCCAAAATTCAATTCCAAGTCTCCAACACTTTCACCTTCAAGTTCTGATTACGCCAGCTCATTTACTTTTTCACCTTCCTCAACCAATTGGTCAGACTTGTCCTTTGTGTCTTCTCGGCAGCCATCACCATCTGGCCTTGAATCAGCTGAACCCCTCTATGTTAAAGATGCATCTTTCTCAGAAAGTTCCTCTTCACTTCACAAAGAAGTTGTCTCTTCACCCTTGGAGGCATTTTCAGCTCATTACTCATTCGAAGGGGCAAACTCTAATTTGCCCTTGAAAGGTTCTTCCCTTTCCATTGCAGAGCGCAGGGGAAGTCATCCACCACCTCTGATGTTGCTATCCTCAGCCAGTGAGACCTCTCACATCCCCAAGAACCTGGAGGACTGCAACTCATAA 1989 0.4701 MLGEEGKEKATGGSGVAWKIYSRSVSWSDRSPHSRKPPTNSKARPLLPPLQPLSINKRNVEEWPSAGSDDLGVWPLPQTPRGSVRANDSSQPTQDFLFKREKLAFFDKECSRIAEHIYLGSDTVAKNHELLRKNGITHVLNCVGFVCPEYFKGDFVYRTLWLQDSPTEDITCILYDVFDYFEDVREQGGRVLVHCCQGVSRSTTLVIAYLMWREGQSFEDAFQFVKIARAVTNPNMGFASQLLQCQKRVHAMPASPNSILRMYRMTPHSPYDPLHLVPKLVNQPGARALDSRGAFIVHIPSAIYVWNGKHCSSVMSCYARSAAFQVIRYEKAKGPILSIHEDEEPPGFWIALSDEQRVSGDSDKGGVMEEEPVLPSDDMGRKVCAYDLDFEIFHKALAGGVVPPFSLSDPGSETCLPAREHGWARLRRKFASGLLTSPRLASEADSTPCNDQSSVIVEAENQHAADEPLSPSSIHPCGSPDSFECYPNSSLGREKDSHEAMDFSVHGVSSSLPLSPPGTSNPFPCFISCSPKFNSKSPTLSPSSSDYASSFTFSPSSTNWSDLSFVSSRQPSPSGLESAEPLYVKDASFSESSSSLHKEVVSSPLEAFSAHYSFEGANSNLPLKGSSLSIAERRGSHPPPLMLLSSASETSHIPKNLEDCNS* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03800 662 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 175 229 IPR000387 GO:0016311|GO:0016791
Phac1g03800 662 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 105 251 IPR029021 -
Phac1g03800 662 Gene3D Severin 261 359 IPR029006 -
Phac1g03800 662 Gene3D Protein tyrosine phosphatase superfamily 84 251 IPR029021 -
Phac1g03800 662 ProSitePatterns Tyrosine specific protein phosphatases active site. 193 203 IPR016130 GO:0016311|GO:0016791
Phac1g03800 662 SMART dsp_5 109 248 IPR020422 GO:0006470|GO:0008138
Phac1g03800 662 SUPERFAMILY Actin depolymerizing proteins 255 358 - -
Phac1g03800 662 MobiDBLite consensus disorder prediction 64 90 - -
Phac1g03800 662 PANTHER MKPA PROTEIN 23 656 - -
Phac1g03800 662 CDD DSP 110 244 - -
Phac1g03800 662 MobiDBLite consensus disorder prediction 25 52 - -
Phac1g03800 662 ProSiteProfiles Dual specificity protein phosphatase domain profile. 109 251 IPR020422 GO:0006470|GO:0008138
Phac1g03800 662 Pfam Dual specificity phosphatase, catalytic domain 117 247 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03800 Phac-Chr1 42736594 42739403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03800 40 145 Protein tyrosine phosphatase (PTP) family AT3G55270 55.172 7.19e-33 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03800 - - gmx:100775448 1067.37