Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03784 ATGCTTCCATTTCACTTCCTCTTTCTTTCCTTCCTTATTAACAAGTTATTCATCATCACCTTTCACACCATCAACAAACACATCATCTGCATGAATTCTGCACACATCATGCAGGTGTCCCTGCACCATCTCCTCATTCTCCTGCTCTCTCTTCGCCATTCCTTAGTCTGCGCCAAATTTCACTGGAATCCAGCATACCCTGCAACCTACGAGGAGATGAGCCGCAGTGACAACGTGAAGGCCTCACTCAGCCTCTCCTTCTCCTGTCTCTTCATTTTCTTCCTCTTGTTCCTTTTCCATAAACTCCGCGAGCGTTTTTTCCCCCTCCCGACAACAACCACCGAAGCGATCAAAAGCTGTCCCACCTTCGAATTCTCCGAGATGAAGGAACTGAGAGTGGGGAACGGGGCAGAGGAGTGCGCCGTGTGCTTGGTGGAGTTCCAAGACTCCGACACCGTGAAGATGCTGCCGCTGTGCCAACATGTTTTCCACCAGCTCTGCATCGATCAATGGCTAGCCTCTCGCCTCACGTGTCCCATTTGTCGCCAGAACCTCGTAACACCTCATACTCAACTCAACATCACCGATGTCCCATCACCAGAACAACAACAAGAACAAGAAGAAGAACAAGGTGAAGATGAAAGTGAAGGTGGTGGTGGCGTGGGACAGGTTTCAGCCACCGTCACAGATTCGTAG 696 0.5014 MLPFHFLFLSFLINKLFIITFHTINKHIICMNSAHIMQVSLHHLLILLLSLRHSLVCAKFHWNPAYPATYEEMSRSDNVKASLSLSFSCLFIFFLLFLFHKLRERFFPLPTTTTEAIKSCPTFEFSEMKELRVGNGAEECAVCLVEFQDSDTVKMLPLCQHVFHQLCIDQWLASRLTCPICRQNLVTPHTQLNITDVPSPEQQQEQEEEQGEDESEGGGGVGQVSATVTDS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03784 231 MobiDBLite consensus disorder prediction 193 231 - -
Phac1g03784 231 SMART ring_2 140 181 IPR001841 -
Phac1g03784 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 189 IPR013083 -
Phac1g03784 231 ProSiteProfiles Zinc finger RING-type profile. 140 182 IPR001841 -
Phac1g03784 231 PANTHER RING-H2 FINGER PROTEIN ATL16 115 209 IPR044600 GO:0016567|GO:0016740
Phac1g03784 231 FunFam E3 ubiquitin-protein ligase ATL6 110 188 - -
Phac1g03784 231 SUPERFAMILY RING/U-box 139 189 - -
Phac1g03784 231 Pfam Ring finger domain 139 182 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03784 Phac-Chr1 42664244 42665193 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03784 115 228 Rapid Response to Elicitors AT2G35000 41.228 8.76e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03784 K10664 - gmx:100804862 142.124