Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phac1g03776 | ATGAAGAAAACTTCGTACCCTAACCCCACTTATCGTCGCTGTGATGCTCATTCTCACACACCACCGCACGGCTGTTCCACTCCCCGCCCAATCTTCCACCGTCCCTTCCACCAATCGAGACCACGCTTTTACCCACATCCCGTCCGCCTCCACCGTCCTCCGGAGCCTTATTTCAAGGTGGAGCTCCGCTTCAGCCTCCGCCCTCCTAGCCGCGACGAGGTGGAGGCTCTGATCAAAGAATGCGAGCACAAGCCTCAGTCTTTCGCTTTCTACCCCGGAGACGACGTCGCCGCCGCGCTCAGTTACCCGAACTGGGAGCAGGCGTGTGACGCGGCCGCTTGGTTCTGGGAGTCGCTGCTTTTGGAGAAACACGGTTACACGCCGGCGCTGGACTCCAACGTTGCGGTCACGGGCGATCTGGATGGCCGCCTTCGAGTGTTGTTCACGAGGCACGTTCAGAGGGTGATGGAGGGGAGAGAGGTTAAGCGGTGGGTGGAGGAGAGTGAACGGTTGTCGAAGGAGATTGCGAGGGTTTCAACTTTGCTTGGGAATGGCTTGCATATTGACTTGAGTAATCACTATATTGAGCAGAAGAAAGGGCTCAATGTTGAGAAAAACCAGGTGGAGAGGAGGTTGAAGGAGTTCGAATCTGCGATGGATTGTATACTGAAGTATCTGGCGGAGGGTGATGACGAGGAGGGTGGTGGGAGTGTGAATGTGTTCAAGTTTGATGGATGTTTTGATTGGAATCGCATTCACTGTCTGATCAGAAGGGAGTGTCGAAGGCTGGAGGATGGATTGCCCATTTATACTTACCGGACAGATATTCTTCAGGAAATACATTATCAGCAGATAATGGTATTAATAGGAGAGACTGGTTCTGGAAAGAGTACTCAGTTAGTTCAGTTTCTTGCTGATTCTGGCATTGGTGCTGATGAATCCATTGTATGCACCCAACCTCGCAAGATTGCTGCCAGATCAGTGGCTCAAAGGGTCCAGGAAGAAAGCAGTGGATGTTATGAAGGGCAATCAATCAAATGTTCTATGTTTTCATCCTTGCATGAGTTTGATTCCAGGATAATATTCACGACAGATCACTGTTTATTGCAGCACTACATGCGTGATAACAATTTGTCTGGGATCTCATGCATCATAATTGATGAGGCTCACGAGAGGAGCTTAAATACAGATTTACTGATGACTTTGTTGAAGAATTTACTTTATAGAAGGGGTGAGATGCGGCTTATCATTATGTCTGCTACAGCTGATGCAAAGCAGCTATCTGATTTCTTTTATTGTTGTGGAATTTTTCGTGTGACTGGGAGAAGTTTTCCAGTGGATGTCAAATATGTTCCTTCTGACCATGCTGGGCATTCTGGTTCTGTTGGTGTTGCCTCATATGTTTCTGATGTTGTCAGAAAGGCAACTGAGGTTCATAAAACAGAGAAAGAGGGAACTATCCTTGCCTTTTTGACCTCTCAGATAGAAGTGGAATATGCCTGTGAAAAGTTTCAAATACCTTCTGCAGTTGCCCTGCCATTGCATGGAAAACTTTCATCTGAAGAGCAATTTCGTGTTTTTCAAAACTACCCTGGAAAGAGAAAAGTGATATTTTCAACAAATCTTGCAGAGACATCACTTACAATTCCTGGTGTTAAGTATGTGATTGATTCTGGTTTATTTAAAGACTGCAGATATGATCCTGGCACTGGGATGAATGTACTTAAGGTTTGCTGGATTAGTCAGAGCTCTGCTGATCAACGGGCTGGTCGTGCTGGGAGGACTGAGCCTGGTGTGTGCTATAGACTGTATTCAGAAACTGATTATCAATCAATGGACCTAAATCAAGAGCCAGAGATTCGGCGAGTTCATCTTGGTGTAGCCGTTTTGAGGATCCTAGCTTTAGGAGTGACGAATGTGCAGGATTTTGATTTTGTGGATGCTCCAAGTTCTAGCTCGATTGATATGGCAATCAGGAATCTAATTCAGTTACGAGCAATTGAGATGAAAAATGATGTTCACAATTTAACGCCAGAGGGTTGGTGCCTGGTAAAAATGGGAATTGAACCCAGGCTGGGTAAACTTATTCTTGGCTGTTTCAAAGATGGTTTGGGTAGGGAAGGTATTGTTCTGGCTGCTGTGATGGCCAATGCCAGTACCATATTTTGCAGAGTTGGGAGTGAATTTGATAAACAAAGATCTGATTGTCTTAAAGTGCAATTTTGCCATTGTGATGGGGACCTCTTTACTCTTCTCTCTGTGTACAAGGAATGGGAAGCTTTGCCTTTGGAAAGGAGGAACAGGTGGTGTTGGGAAAACAGCATCAATGCCAAATCTATGAGGAGATGCCAAGACACAGTTTTGGAGTTAGAAAGTTGCCTGGAACGTGAACACGACCTTGTTACTCCGAGTTGTTGGCGATGGGATCCATGTATGCCCTCTAGTTATGATAAGAATTTGAAGAGGGTTATACTGTCCTCACTTGCCGAGAATGTAGCGATGTACTCTGGCTGCAATCAACTTGGTTATGAAGTGGCACAAACTGGGCAACATGTTCAGCTACATCCATCTTGTTCATTGCTTGTTTTTGCTCAGAAACCAAGTTGGGTGGTTTTTGGTGAGCTTCTTTCTGTCTCTAATCAATATTTGGTCTGTGTGAGCACATTTGACTTTCAATCATTATATGACCTTCGCCCTGCTCCCTTGTTTGATGTATCTAAAATGGTGGAGCGGAAGTTGCAAATGAAGACCTTGTGTGGTCTTGGCTGTATTCTTCTCAAGAGATTTTGTGGAAAAGCCAACTGTAATTTGCTTGCACTTATTTCACGTATAAGGAAAGCTTGTATGGATGAACGTATCTACATTGAAGTAAATGTTGACCAGAATGCAATCCACTTATTTGCCACTTCAAATGATATGGATGCAGCCCTTGTGTTGGTTAATGGTGCTCTAGAATATGAGAGGAAGTTGCTACGCGCTGAATGCATGGATAAGTGTTTGTATCATGGGTCTGGTCTTTCTCCACCTATAGCTTTGTTTGGGTCTGGTGCTGAGATCAAACATTTGGAACTTGAGAAACGTTCCTTGAGTATTGATGTGTGTCATGCCAACATAAATGCAATTGATGACAAAGAGCTCTTAATGTTTTTAGAGAAGAATACCTCTGGTAGTATCTGTGCTGTGTACAAATTTTCGGGCAATATGAAAGATGAAGATAAGGATAAGTGGGGCAGGATATTGTTTAGGTCCCCTGATTTTGTCGAAAGAGCTACTGAACTAGATGGACATGAGTTTTGTGGCTCCTCCTTGAAAATTTTACCTTCGCAGTTGGGAGGGGATAAAATGTTTTCGTTCCCTGCTGTTAAAGCAAAAATTTCTTGGCCTCGTAGGTCTAGCAGGGGATTTGCCGTAGTTAAATGTGATATAAAAGATGTCAATCATATATTGAGAGATTTCTACAACCTTGCAATAGGGGGAAGGTATGTTCGATGTGAAGTTGGAAAAAAGAGTATGGACAGTGTTATTATAAATGGGCTTGGCAAAGACCTCTCGGAAGCTGAAATACTGGATGTGCTAAGAACTGCTACAAGTAGAAGGATTTTGGATTTTTTCTTGGTGAGAGGGGATGCTGTTGGAAATCCTCCATGCAGTGCTTTGGAAGAGGCACTCCTAAAAGAAATTTACCCCTCTTTGCCCAAAAGGAACCCTCACATTAGTTCTTGCCGAGTTCAGGTGTTTGTACCTGAGCCTAAGGATGCCTTTATGAGAGCTCTAATCAGTTTCGATGGAAGATTGCATTTAGAAGCAGCAAAAGCTTTGGAGCAGATTGAAGGAAAGGTGTTACCTGGATGTCTATCATGGCAAAAGATAAAGTGCCAGCGGTTGTTTCATAGCTCCTTGATATTTCCTATACCAGTGTTTCGTGTGATTAGGGAACAACTGGATGGAGTACTTGCAAGGTTCAGGAATTTAAAAGGTCTTGAATGCAACCTGGACAGGACAGTTAATGGTTCCCACCGAGTGAAGATAACTGCGAACGCAACAAAGACAGTGGCAGAAGTTAGAAGACCTCTGGAGGAACTATTGAGAGGGAAAACTGTTGAGCATGACAGCCTCACCCCTGCAGTTCTCCAGCTCCTGATGTCCAAGGATGGCTTTAATCTTAAAAACTCATTGCAGCAAGAGACAGGAACCTACATTCTTTTTGACAGGCACAACTTGAATTTACGTGTGTTTGGTTCCCCAAACAAGGTTGCTTTGGCTCATGACAAGTTGATTCAATCCCTCCTTTCTCTCCATGAAGAAAAGCAGTTAAAAATCCATCTGAGAGGAAGGGATTTACCTCCTGATTTAATGAAGCAAATGATTAAGAATTTTGGGCCAGATCTCCGTGGACTGAAAGAAAGGGTACCTGGGGTAGATCTTACGCTCAACATAAGTCGCCACGTAATCAGTCTTAATGGTAGGAAGGAGTTGAAACCCAGGGTAGAGGAAATAATTTTTGAGATTGCTCGTTCAAGCCATCATTTGGTTGGGACATTTGATAATGATGGTCCTAATTGCCCGATTTGCTTGTGCGAGGTTGAGGATGCATACCGGCTTGAAGGCTGTGGTCATGTGTTCTGCCGGTCGTGTCTGGTGGAACAATGTGAATCTGCTATTAGAAACCAAGGCACCTTCCCAATATGTTGTACTAACAAGGACTGTGGAGATATCATCCTGCTTACGGATCTGAGATCTCTCTTAGTTGGTGATAAGTTGGAGGATCTTTTCAGGGCTTCTTTAGGAGCTTTTGTGGCTACGAGTGGGGGAACTTACAGGTTTTGCCCATCTCCAGACTGCCCCTCAATTTATCGAGTTGCGGATCCTGGGACTGCTGGTGAGCCATTTGTTTGTGGGGCTTGTTATTCAGAGACATGTACCAGGTGCCACTTAGAGTATCATCCATACCTTTCATGCGAGAGATATAAAGAGTTCAAGGAAGATCCGGATTCATCTCTGATACAGTGGTGCAGAGGGAAAGACGAAGTTAAGAGTTGTTTGGCGTGTGGATATGTAATTGAGAAGGTGGACGGGTGCAACCATGTTGAGTGCAAGTGTGGAAAACATGTGTGCTGGGTTTGCTTAGAGTTCTTCAGCGCTAGTGATGAATGCTATAGCCATCTGAGAAATGTTCACAGGACCATCATATAA | 5193 | 0.4429 | MKKTSYPNPTYRRCDAHSHTPPHGCSTPRPIFHRPFHQSRPRFYPHPVRLHRPPEPYFKVELRFSLRPPSRDEVEALIKECEHKPQSFAFYPGDDVAAALSYPNWEQACDAAAWFWESLLLEKHGYTPALDSNVAVTGDLDGRLRVLFTRHVQRVMEGREVKRWVEESERLSKEIARVSTLLGNGLHIDLSNHYIEQKKGLNVEKNQVERRLKEFESAMDCILKYLAEGDDEEGGGSVNVFKFDGCFDWNRIHCLIRRECRRLEDGLPIYTYRTDILQEIHYQQIMVLIGETGSGKSTQLVQFLADSGIGADESIVCTQPRKIAARSVAQRVQEESSGCYEGQSIKCSMFSSLHEFDSRIIFTTDHCLLQHYMRDNNLSGISCIIIDEAHERSLNTDLLMTLLKNLLYRRGEMRLIIMSATADAKQLSDFFYCCGIFRVTGRSFPVDVKYVPSDHAGHSGSVGVASYVSDVVRKATEVHKTEKEGTILAFLTSQIEVEYACEKFQIPSAVALPLHGKLSSEEQFRVFQNYPGKRKVIFSTNLAETSLTIPGVKYVIDSGLFKDCRYDPGTGMNVLKVCWISQSSADQRAGRAGRTEPGVCYRLYSETDYQSMDLNQEPEIRRVHLGVAVLRILALGVTNVQDFDFVDAPSSSSIDMAIRNLIQLRAIEMKNDVHNLTPEGWCLVKMGIEPRLGKLILGCFKDGLGREGIVLAAVMANASTIFCRVGSEFDKQRSDCLKVQFCHCDGDLFTLLSVYKEWEALPLERRNRWCWENSINAKSMRRCQDTVLELESCLEREHDLVTPSCWRWDPCMPSSYDKNLKRVILSSLAENVAMYSGCNQLGYEVAQTGQHVQLHPSCSLLVFAQKPSWVVFGELLSVSNQYLVCVSTFDFQSLYDLRPAPLFDVSKMVERKLQMKTLCGLGCILLKRFCGKANCNLLALISRIRKACMDERIYIEVNVDQNAIHLFATSNDMDAALVLVNGALEYERKLLRAECMDKCLYHGSGLSPPIALFGSGAEIKHLELEKRSLSIDVCHANINAIDDKELLMFLEKNTSGSICAVYKFSGNMKDEDKDKWGRILFRSPDFVERATELDGHEFCGSSLKILPSQLGGDKMFSFPAVKAKISWPRRSSRGFAVVKCDIKDVNHILRDFYNLAIGGRYVRCEVGKKSMDSVIINGLGKDLSEAEILDVLRTATSRRILDFFLVRGDAVGNPPCSALEEALLKEIYPSLPKRNPHISSCRVQVFVPEPKDAFMRALISFDGRLHLEAAKALEQIEGKVLPGCLSWQKIKCQRLFHSSLIFPIPVFRVIREQLDGVLARFRNLKGLECNLDRTVNGSHRVKITANATKTVAEVRRPLEELLRGKTVEHDSLTPAVLQLLMSKDGFNLKNSLQQETGTYILFDRHNLNLRVFGSPNKVALAHDKLIQSLLSLHEEKQLKIHLRGRDLPPDLMKQMIKNFGPDLRGLKERVPGVDLTLNISRHVISLNGRKELKPRVEEIIFEIARSSHHLVGTFDNDGPNCPICLCEVEDAYRLEGCGHVFCRSCLVEQCESAIRNQGTFPICCTNKDCGDIILLTDLRSLLVGDKLEDLFRASLGAFVATSGGTYRFCPSPDCPSIYRVADPGTAGEPFVCGACYSETCTRCHLEYHPYLSCERYKEFKEDPDSSLIQWCRGKDEVKSCLACGYVIEKVDGCNHVECKCGKHVCWVCLEFFSASDECYSHLRNVHRTII* | 1731 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phac1g03776 | 1730 | ProSiteProfiles | Zinc finger RING-type profile. | 1521 | 1563 | IPR001841 | - | |
| Phac1g03776 | 1730 | FunFam | Pre-mRNA-splicing factor ATP-dependent RNA helicase | 618 | 661 | - | - | |
| Phac1g03776 | 1730 | SMART | ibrneu5 | 1654 | 1718 | IPR002867 | GO:0008270 | |
| Phac1g03776 | 1730 | SMART | ibrneu5 | 1585 | 1653 | IPR002867 | GO:0008270 | |
| Phac1g03776 | 1730 | SMART | ultradead3 | 265 | 449 | IPR014001 | - | |
| Phac1g03776 | 1730 | SUPERFAMILY | RING/U-box | 1675 | 1723 | - | - | |
| Phac1g03776 | 1730 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 267 | 773 | IPR027417 | - | |
| Phac1g03776 | 1730 | FunFam | ATP-dependent RNA helicase DEAH12 chloroplastic | 250 | 442 | - | - | |
| Phac1g03776 | 1730 | CDD | BRcat_RBR | 1605 | 1656 | - | - | |
| Phac1g03776 | 1730 | SUPERFAMILY | RING/U-box | 1604 | 1659 | - | - |
Showing 1 to 10 of 37 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Phac1g03776 | K12818 | - | gmx:100810008 | 2979.5 |
Showing 1 to 1 of 1 entries