Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03775 ATGAAGAGACTTAGCAGCAGCTCAGATTCTTCTTCCACTCCCCTCATCACAATTTGTCCAACACCAGAGGAACAGAGTACGAGAAACTGCCAGCAGCACGTGTATGGTAGGGAGTTCCAATCGATGATGCTTGAGGGACTTGACGAGGAAGGTTGTGTTGAAGAAGTGGGGCATCAATCTGAGAAGAAACGTAGACTAAGTGTAGATCAAGTGAAGGCTTTGGAGAAGAACTTCGAGGTTGAAAACAAGCTTGAACCCGAGAGGAAGGTCAAACTTGCCCAAGAACTTGGGTTGCAACCTAGACAAGTAGCAGTTTGGTTCCAGAACCGTCGAGCAAGGTGGAAAACCAAACAATTGGAGAGAGATTACGGTGTTCTCAAAGCCAATTTTGATGCTCTCAAGCTCAACTATGACACCCTCAATCACGACAACGAAGCCTTACGGAAGCAGATAAAGGAGCTTAAACTGAGGTTGGAAGAAGGGGTTTCAGTGAAGGAGGAGATAATGATGCCTGACTCGGAAGACAAAACGACGATGGAACAGAGTAAGAGCGAACCTAGTTGGGGATCCGAGGAACAGTTGAACTACGAGTGTTTCAACAACAGCAACAACGATTGTTTCGGAGGCGCTTCGCTGTTCCCAGTGGACTTCAAAGACGGTTCTTCCGACAGCGATTCGAGCGCAATCTTGAACGAAGAGAACAACAAGTGCAGCCCCATAACTGAAGATCTGTTGCTGTCACCGAAATCTTCCTCAATGAACTGTTTGCAGTTCCAGAAAGCGTATCAGACGCAGTACGTGGTAAAGATGGAGGAGCACAATTTCTTGAGCGCGGACGAGGCCTGCAATTTCTTTTCGGATGAACAGGCTCCAACGTTGCAGTGGTGGAGCTGA 894 0.4754 MKRLSSSSDSSSTPLITICPTPEEQSTRNCQQHVYGREFQSMMLEGLDEEGCVEEVGHQSEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANFDALKLNYDTLNHDNEALRKQIKELKLRLEEGVSVKEEIMMPDSEDKTTMEQSKSEPSWGSEEQLNYECFNNSNNDCFGGASLFPVDFKDGSSDSDSSAILNEENNKCSPITEDLLLSPKSSSMNCLQFQKAYQTQYVVKMEEHNFLSADEACNFFSDEQAPTLQWWS* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03775 297 Coils Coil 130 164 - -
Phac1g03775 297 CDD homeodomain 62 118 IPR001356 GO:0003677
Phac1g03775 297 SMART HOX_1 60 121 IPR001356 GO:0003677
Phac1g03775 297 Pfam Homeodomain 62 115 IPR001356 GO:0003677
Phac1g03775 297 Gene3D - 56 124 - -
Phac1g03775 297 PRINTS Lambda-repressor HTH signature 97 113 IPR000047 GO:0003677
Phac1g03775 297 PRINTS Lambda-repressor HTH signature 88 97 IPR000047 GO:0003677
Phac1g03775 297 SUPERFAMILY Homeodomain-like 47 119 IPR009057 -
Phac1g03775 297 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 43 278 IPR045224 GO:0003700
Phac1g03775 297 ProSitePatterns 'Homeobox' domain signature. 92 115 IPR017970 GO:0000981|GO:0006355
Phac1g03775 297 FunFam Homeobox-leucine zipper protein HAT5 55 119 - -
Phac1g03775 297 ProSiteProfiles 'Homeobox' domain profile. 57 117 IPR001356 GO:0003677
Phac1g03775 297 Pfam Homeobox associated leucine zipper 117 158 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03775 Phac-Chr1 42625959 42628406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03775 1 297 Homeobox Transcription Factor Family AT2G22430 47.305 2.37e-69 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac1g03775 Homeodomain 2.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03775 K09338 - gmx:100777924 394.045