Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03739 ATGACGCAGCAGAATGTGGTAGTGTCTGACACCAAATCTGGAGTTTCCCTAACAGTTTTTCCAACACCTGCACAAAAAAAGCCACCTGCAGCACCAGGAGGGTACATTTCTATTTCAAGGAGGAGGGTTTTGAAGAACCTTGAAATCAATGGAGACCAAAGAATCAATGCATGGGTTGAGTCCATGAGAGCCTCGTCTCCAACCCATCTTAAATCCACACCTTCTTTCTCTCAGGAGCAAAACTCTTGGATTCTTCACCATCCGTCGGCATTAGACATGTTTGACCAAATTATTGACGCGTCAAAGGGAAAACAAATTGTCATGTTTCTGGACTATGATGGAACACTCTCCCCAATTGTTGAAGATCCTGACCGTGCTTTCATGTCTCATTCGATGAGAAAAACAGTGAGGAAACTTGCTAGGTGTTTTCCTACTGCCATAGTGACTGGCAGATGCAAAGACAAGGTATACAATTTTGTTCAGTTGGCAGAGCTATACTACGCAGGAAGCCATGGAATGGATATTAAAGGGCCAACGAGAAGCTCCAAATACAACAAAGATGCCAAAGCTGAGGCAATTCTTTTTCAACCTGCCAGCGATTTTCTTCCCATGATAGATGAGGTGTACCAACAGTTGGTTGAGAAGACCAAATCAACTCCTGGAGCCATGGTTGAGAACAACAAGTTCTGCCTCTCTGTTCATTTTCGTTGTGTTGATGAAAAGAAATGGAGTGACCTGGCACGCCAAGTGAAATCAGTTTTAAAGGAGTACCCCAAGCTCCGACTTACCCAAGGAAGAAAGGTGCTAGAGATTCGTCCCACTATTAAATGGGACAAAGGAAAGGCCCTGGAATTTTTATTAGAGTCCCTTGGTTTGGCCAATTGCAGTGACGTCTTTCCTGTTTATATTGGCGATGATCGATCCGATGAAGATGCTTTCAAGAAATTGAGAGACAGAGGACAAGGTTTTGGCATTCTTGTCTCCAAATTTCCAAAAGACACAAGTGCATCTTACTCTTTACAAGAACCAAACGAGGTGATGAACTTTCTTCAACGCTTGGTGGAGTGGAAACATGTGTCCCAACGAGCACGTTCCCGGGTGTAA 1104 0.4384 MTQQNVVVSDTKSGVSLTVFPTPAQKKPPAAPGGYISISRRRVLKNLEINGDQRINAWVESMRASSPTHLKSTPSFSQEQNSWILHHPSALDMFDQIIDASKGKQIVMFLDYDGTLSPIVEDPDRAFMSHSMRKTVRKLARCFPTAIVTGRCKDKVYNFVQLAELYYAGSHGMDIKGPTRSSKYNKDAKAEAILFQPASDFLPMIDEVYQQLVEKTKSTPGAMVENNKFCLSVHFRCVDEKKWSDLARQVKSVLKEYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGLANCSDVFPVYIGDDRSDEDAFKKLRDRGQGFGILVSKFPKDTSASYSLQEPNEVMNFLQRLVEWKHVSQRARSRV* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03739 367 CDD HAD_TPP 107 348 - -
Phac1g03739 367 NCBIfam trehalose-phosphatase 104 354 IPR003337 GO:0003824|GO:0005992
Phac1g03739 367 Pfam Trehalose-phosphatase 109 343 IPR003337 GO:0003824|GO:0005992
Phac1g03739 367 NCBIfam HAD-IIB family hydrolase 108 319 IPR006379 -
Phac1g03739 367 Gene3D - 212 366 IPR023214 -
Phac1g03739 367 Gene3D - 106 204 IPR023214 -
Phac1g03739 367 FunFam Trehalose 6-phosphate phosphatase 198 274 - -
Phac1g03739 367 FunFam Trehalose 6-phosphate phosphatase 106 193 - -
Phac1g03739 367 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 27 363 IPR044651 GO:0004805|GO:0005992
Phac1g03739 367 FunFam Trehalose 6-phosphate phosphatase 204 363 - -
Phac1g03739 367 SUPERFAMILY HAD-like 107 356 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03739 Phac-Chr1 42374649 42377545 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03739 102 353 Trehalose Biosynthesis Gene Families AT1G70290 25.830 9.20e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03739 K01087 - gmx:100794430 690.263