Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03737 ATGACGCAGCAGAATGTGGTAGTGTCTGACACCAAATCTGGAGTTTCCCTAACAGTTTTTCCAACACCTGCACAAAAAAAGCCACCTGCAGCACCAGGAGGGTACATTTCTATTTCAAGGAGGAGGGTTTTGAAGAACCTTGAAATCAATGGAGACCAAAGAATCAATGCATGGGTTGAGTCCATGAGAGCCTCGTCTCCAACCCATCTTAAATCCACACCTTCTTTCTCTCAGGAGCAAAACTCTTGGATTCTTCACCATCCGTCGGCATTAGACATGTTTGACCAAATTATTGACGCGTCAAAGGGAAAACAAATTGTCATGTTTCTGGACTATGATGGAACACTCTCCCCAATTGTTGAAGATCCTGACCGTGCTTTCATGTCTCATTCGATGAGAAAAACAGTGAGGAAACTTGCTAGGTGTTTTCCTACTGCCATAGTGACTGGCAGATGCAAAGACAAGGTATACAATTTTGTTCAGTTGGCAGAGCTATACTACGCAGGAAGCCATGGAATGGATATTAAAGGGCCAACGAGAAGCTCCAAATACAACAAAGATGCCAAAGCTGAGGCAATTCTTTTTCAACCTGCCAGCGATTTTCTTCCCATGATAGATGAGGTGTACCAACAGTTGGTTGAGAAGACCAAATCAACTCCTGGAGCCATGGTTGAGAACAACAAGTTCTGCCTCTCTGTTCATTTTCGTTGTGTTGATGAAAAGAAATGGAGTGACCTGGCACGCCAAGTGAAATCAGTTTTAAAGGAGTACCCCAAGCTCCGACTTACCCAAGGAAGAAAGGTGCTAGAGATTCGTCCCACTATTAAATGGGACAAAGGAAAGGCCCTGGAATTTTTATTAGAGTCCCTTGGTTTGGCCAATTGCAGTGACGTCTTTCCTGTTTATATTGGCGATGATCGATCCGATGAAGATGCTTTCAAGAAATTGAGAGACAGAGGACAAGGTTTTGGCATTCTTGTCTCCAAATTTCCAAAAGACACAAGTGCATCTTACTCTTTACAAGAACCAAACGAGGTAAGCAGAATTTTCTCAGTTCATATTTTTTTTACACCATTTTATTCAATACAAGTGATTAGTATTATTTATGTATTGATTTGTTTCAGGTGA 1128 0.4184 MTQQNVVVSDTKSGVSLTVFPTPAQKKPPAAPGGYISISRRRVLKNLEINGDQRINAWVESMRASSPTHLKSTPSFSQEQNSWILHHPSALDMFDQIIDASKGKQIVMFLDYDGTLSPIVEDPDRAFMSHSMRKTVRKLARCFPTAIVTGRCKDKVYNFVQLAELYYAGSHGMDIKGPTRSSKYNKDAKAEAILFQPASDFLPMIDEVYQQLVEKTKSTPGAMVENNKFCLSVHFRCVDEKKWSDLARQVKSVLKEYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGLANCSDVFPVYIGDDRSDEDAFKKLRDRGQGFGILVSKFPKDTSASYSLQEPNEVSRIFSVHIFFTPFYSIQVISIIYVLICFR* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03737 375 CDD HAD_TPP 107 348 - -
Phac1g03737 375 NCBIfam HAD-IIB family hydrolase 108 319 IPR006379 -
Phac1g03737 375 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 27 349 IPR044651 GO:0004805|GO:0005992
Phac1g03737 375 Pfam Trehalose-phosphatase 109 343 IPR003337 GO:0003824|GO:0005992
Phac1g03737 375 SUPERFAMILY HAD-like 107 351 IPR036412 -
Phac1g03737 375 Gene3D - 188 274 - -
Phac1g03737 375 Gene3D - 108 340 IPR023214 -
Phac1g03737 375 FunFam Trehalose 6-phosphate phosphatase 204 356 - -
Phac1g03737 375 FunFam Trehalose 6-phosphate phosphatase 198 274 - -
Phac1g03737 375 FunFam Trehalose 6-phosphate phosphatase 106 193 - -
Phac1g03737 375 NCBIfam trehalose-phosphatase 104 351 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03737 Phac-Chr1 42374649 42377545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03737 102 316 Trehalose Biosynthesis Gene Families AT1G70290 26.667 1.78e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03737 K01087 - gmx:100794430 654.825