Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03736 ATGACAACAGTTATGGATAGCATGATGGTGTCAGATTTCTTATACCCCTGTAATGATCAAGAGCTGATGAAAGCACTTGAACCTTTTATGAAAAGTGATTCATCAACCACTTCCTCAATAACTTACCCTTCATTATCTTCTCCAAACTTCTCCTTCAGCTATGAGTCCCAAAAGGGTCTAAACCAACCCAGTTCCATCAAACTCAACCAGCTCACCCCATCTCAAACATTCCAGATTCAGGCCCAAATCCAGGTTACACGAGCCCAGTTTCTCAGTCCAAAGCCCGTTCCGATGAAGCAGGTGGGTGGTGGTGTTCCTTCCAAGCCCACAAAGCTTTACCGTGGGGTGAGGCAGAGACACTGGGGCAAGTGGGTGGCGGAGATCAGACTTCCCAAGAATCGCACTCGTCTCTGGCTTGGTACATTCGAAACCGCTGAAGAAGCAGCTTTGGCATACGACAACGCAGCGTTTAAGCTCAGAGGAGAAAACGCGAGGCTCAACTTCCATCATCTACGTCACCATGGAGCAAGTGTCTACGGTGCGTTTGGGACCTACAAGCCTCTCCCTTCTGCAGTGGACGCCAAGCTCCAAGCCATTTGTCAAAGCTTGGCCATCAACACACACAAGGAAGAAGAAACAGCAACAACATCGGAGTTCGAGGATGTTAAGGTCGGGAACCAAACAGCATCCTCGCCCTTGTCGGATGAATATTCTTCTTCTTCATCTTCTTCTTGTGCCGGTTCCTCTTCCCCTGAATCCGATATCACTTTCTTGGATTTCTCGGATTCTTATGAAGCAATGGACAATCTTGGGTTGGACTTGGAGAAGTACCCTTCTGTGGAGATTGATTGGGAAGCTTTATCTGAGTCATGA 873 0.4777 MTTVMDSMMVSDFLYPCNDQELMKALEPFMKSDSSTTSSITYPSLSSPNFSFSYESQKGLNQPSSIKLNQLTPSQTFQIQAQIQVTRAQFLSPKPVPMKQVGGGVPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEEAALAYDNAAFKLRGENARLNFHHLRHHGASVYGAFGTYKPLPSAVDAKLQAICQSLAINTHKEEETATTSEFEDVKVGNQTASSPLSDEYSSSSSSSCAGSSSPESDITFLDFSDSYEAMDNLGLDLEKYPSVEIDWEALSES* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03736 290 CDD AP2 111 168 IPR001471 GO:0003700|GO:0006355
Phac1g03736 290 MobiDBLite consensus disorder prediction 210 252 - -
Phac1g03736 290 SMART rav1_2 112 175 IPR001471 GO:0003700|GO:0006355
Phac1g03736 290 MobiDBLite consensus disorder prediction 219 252 - -
Phac1g03736 290 PRINTS Ethylene responsive element binding protein signature 135 151 IPR001471 GO:0003700|GO:0006355
Phac1g03736 290 PRINTS Ethylene responsive element binding protein signature 113 124 IPR001471 GO:0003700|GO:0006355
Phac1g03736 290 Pfam AP2 domain 113 162 IPR001471 GO:0003700|GO:0006355
Phac1g03736 290 SUPERFAMILY DNA-binding domain 112 170 IPR016177 GO:0003677
Phac1g03736 290 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 19 288 - -
Phac1g03736 290 Gene3D AP2/ERF domain 112 170 IPR036955 GO:0003700|GO:0006355
Phac1g03736 290 FunFam Ethylene-responsive transcription factor 2 111 170 - -
Phac1g03736 290 ProSiteProfiles AP2/ERF domain profile. 112 169 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03736 Phac-Chr1 42360719 42362122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03736 20 289 AP2-EREBP Transcription Factor Family AT4G39780 51.636 2.62e-77 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac1g03736 AP2 1.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03736 K09286 - gmx:106796800 380.563