Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03718 ATGGAGGATCCTGATGGGACATTAGCAAGTGTTGCCCAATGCATTGAGCAGCTGCGTCAGAGCTCATCTTCTATGCAGGAGAAAGAGTATTCTTTGAAGCAGTTATTGGAGCTTATTGATATTAGAGAAAACGCTTTCAGTGCTGTTGGATCTCATTCTCAGGCAGTTCCAGTACTTGTTTCCCTTCTCCGGTCAGGGTCTTCGAATGTGAAGATACAGGCAGCAACTGTATTGGGTTCACTTTGTAAACAAAATGAGTTGAGGGTGAAAGTCTTGCTTGGAGGATGCATTCCACCTTTGCTTGGTCTACTCAAGTCCAGTTCTGCTGAAGGTCAAGTGGCTGCTGCAAAGACAATTTTTGCTGTTTCTCAAGGTGGTGCCAAAGATCATGTTGGATCAAAAATTTTTTCAACTGAAGGAGTGGTTCCAGTGCTATGGGAGCAGTTGCAGAAGGGCCTGAAGACAAATGTAGTTGATAATTTATTAACAGGGGCATTGAAAAATCTCTCCAGCAGCACTGATAGATTCTGGAATGCCACAATACAAGCTGGAGGGGTGGACATATTAATTAAGTTACTGAAAACAGGGCAGTCTAACACTTTAGCAAATGTGTGCTTTTTACTTGGCTGTATGATGATGGAGGATGCATCTGTTTGTTCAAAATTGTTGACTGCTGAGGAAACTAAACAACTCCTCAAACTTTTAAGCCCTGGTAATGATGCCCCTGTCAGGGCTGAAGCAGCCGGTGCTCTTAAATCTCTTTCTGCTCAGTGCAAAGATGCAAGAAAAGAGATAGCCAATTCCAATGGCATTCCTGCTTTGATTAATGCTACCATAGCTCCTTCCAAAGAGTTCATGCAGGGTGAGTATGCTCAAGCATTACAGGAGAATGCAATGTGTGCTTTAGCAAACATCTCTGGTGGTTTGTCATATGTCATCTCCAGTCTTGGTCAAAGCCTTGAATCATGCTCCTCGCCTGCCCAAGCTGCTGACACGTTGGGGGCTTTAGCTTCAGCTCTTATGATTTATGATGACAATGCAGAATCTACCAGGGCCACAGATCCTTTGGTAGTTGAGCAGACATTACTTGAACAATTTAAACCTGGCTTGTCATTCCTTGTACAGGAACGGACCATTGAAGCCCTGGCTAGTTTGTATAGCAATCCTATACTGTCAATCAAACTTGCAAATTCTGATCCAAAGCGTTTGCTTGTTGGTTTAATAACAATGGCTGCCAATGAAGTGCAAGATGAACTTCTAAAATCTCTCTTGACATTGTGCAATACTGAATGCAGTCTGTGGCGTGCACTTCAAGGCCGTGAAGGAGTTCAGCTGTTGATATCTCTTCTGGGGCTTTCATCGGAACAACAGCAAGAATGTGCTGTTGCCCTCCTTTGCCTTTTATCTAATGAAAATGATGAAAGTAAATGGGCTATTACTGCTGCTGGTGGTATACCTCCTCTTGTTCAAATTTTGGAGTCAGGATCTGCAAAAGCAAAGGAAGACTCAGCGTCAATCCTTAGGAACCTATGTGATCACAGTGAGGATATACGTGCTTGTGTTGAAAGTGCTGATGCTGTTCCTGCATTGCTTTGGCTGTTGAAGAATGGAAGCCCAAATGGGAAGGAGATTGCAGCAAAGACTTTGAATCACTTAATTCATAAGTCTGATACAGCAACTATCAGTCAGCTTACAGCATTATTGACCAGTGATTTACCTGAATCTAAGGCTTATGTTTTAGATGCTTTGAAAAGTATGCTTTCAGTTGTTGCTCTTACTGATCTTCTACGTGAAGGCAGTGCTGCCAGTGATGCAGTTGATACAATGATAAAATTACTGAGCTCAACCGAGGAAGAAACTCAGGCAAAGTCTGTGTCTGCTCTGGCGGGAATTTTTGAAATGAGGAAAGATGTGCGTGAAAGCAGCATTGCTGTTAAAACTCTTTGGTCAGCAATGAAGTTGCTTAATGTTGAATCAGAAAGTATCTTAATGGAGTCCTCACGCTGCTTGGCTGCAATATTTCTTTCCATCAAAGAGAACAGGGATGTGGTTGCTATTGCTAGAGATGCTTTACCCTCCCTAGTTTCACTAGCTAACTCTTCAGTTTTGGAAGTGGCGGAGCTGGCAACATGTGCTGTGGCAAATCTTATTTTGGACAGTGAAATTGCTGAGAAAGCTGTTGCAGAAGAAGTCATATTGGCTGCTACCAGAGTATTACGTGAAGGTACAATTTCTGGAAAATCACATGCTGCTGCAGCAATTGCTCGCCTTTTACATTCTAAGAGGCAAGTTGATTATGCTGTAACTGATTGTGTGAATCGAGCTGGCACTGTTCTTGCATTAGTTTCTTTCTTAGACTTTGCTATCAGTGGACTTAGTTCCACATCAGAAGCTCTAGAAGCACTTGCCATGCTGTCCAGGTTAGAAGTGAATGGTGCACACAGTAAGCCTGCTTGGGCAGTTTTGGCTGAATTTCCTAAAAGCATCAGCCCAATCGTTCTGTCCATTACTGATTCAACGCCAGTGTTGCAGGATAAAGCTATTGAAATTTTATCTCGATTATGTAAGGATCAACCTTTTGTTCTGGGAGACATTGTTGTTTCTGCCTCTGGATGTATATCTTCTATAGCTAAGAGGATAATCAATTCGACTTCTCAAAATATTAAGGTCAAAATTGGAGGAGTTGCTGTTCTTATTTGTGCTGCTAAAGTAAATCACCAGAGGCTGGTGGAGGATCTCAATCTATCAAACTTGTGTGGTAATCTAGTTCAGTCTCTTGTCGATATACTTATTTCTTCACAGGCTACTTTGGGTTATCAACGTGATGACAGCAGGGACGTTATCAGAATTTGCAGGCATACAAAAGAAGCCAATGATGGTAAATCAAGCACTGGCACCACTATTATTTCCGGTGCCAACTTAGCTATATGGTTACTAACTGTTCTTGCTTGTCATGATGAAAAATGTAAAACTACAATAATGGAGACGGGTGCAATTGAGTTTCTGAGTGACAGGATTGCAAATTGTTTCTCACTGTACAGTCAGATTGACTACAAAGAAGATAGCAGCATGTGGATTTGTGCTTTGTTGTTGGCAATATTATTTCAGGATAGGGATATTATACGAGCACATGCAACCATGAAATCTATACCAGCACTTGCCAATTTATTGAAGTCAGAGGAATCAGCAAACAGATATTTTGCTGCACAATCAATAGCTAGCCTAGTCTGTAATGGTAGCAGGGGAACACTCCTGTCTGTGGCAAATTCTGGGGCAGCAGGTGGACTTATCTCCTTGCTTGGCTGTGCTGATACTGATATACAAGATCTTCTAGAATTGTCAGAGGAATTTTCTTTGGTGCATTATCCTGATCAAGTTGCTCTTGAGAGGTTGTTTAGAGTTGATGACATAAGAGTTGGTGCCACTTCTCGGAAGGCAATACCTGCTCTAGTTGATCTGCTCAAACCAATTCCAGAACGTCCTGGTGCACCATTTTTAGCACTTGGGCTTTTGACTCAGCTTGCTATAGATTGTCCATCAAATAAGATTGTAATGGTTGAGGCAGGTGCCCTGGAGGCACTTTCTAAGTATCTTTCACTAGGTCCACAAGATGCAACAGAAGAGGCTGCTACAGATCTGTTAGGGATTCTGTTTAGCAGTGCAGAAATACGGAGACATGAATCAGCATTTGGAGCTGTTACTCAACTTGTAGCTGTACTGCGTTTAGGAGGAAGAGCTGCAAGGTATAGGGCTGCAAAAGCTTTGGAAAGTTTATTCTCCTCTGACCACATTAGAAATGCAGAGACTGCTCGACAAGCTGTCCAACCCTTGGTGGAGATTCTTAATACTGGTTTAGAGAGAGAGCAGCATGCTGCAATTGCTGCATTAGTTAGGTTATTGAGTGAAAACCCTTCAAAAGCACTCGCTGTTGCAGATGTAGAGATGAATGCAGTGGATGTTCTTTGTAGGATTCTTTCATCAGATTGTTCAATGGACCTCAAAGGGGATGCTGCTGAATTATGTTCTGTTCTTTTTGGAAATACAAGGATTCGGTCCACAATGGCTGCTGCACGTTGTGTTGAACCCCTTGTCTCTCTCCTTGTAAGTGAGTTTGGTCCTTCTCACCATCCAGTTGTGCGGGCATTGGATAGGCTTGTTGATGATGAGCAACTAGCTGAACTAGTTGCTGCACATGGTGCAGTTATTCCTCTTGTTGGCCTACTTTACGGAAGGAATTATGTACTTCATGAGGCCATTTCCAGAGCTCTGGTCAAGTTGGGAAAAGACAGGCCAGCTTGCAAAATGGAAATGGTGAAAGCTGGAATTATTGAAAGCATACTTGACATCCTTCATGAAGCACCTGATTATCTATGTGCAGCTTTTGCTGAATTGTTGCGTATATTGACCAATAATGCTAGCATAGCTAAAGGACCACCGGCTGCTAAAGTCGTTGAACCGCTGTTTATGTTGCTAATAAGACAAGACTTTGGACCAGATGGACAACATAGTGCATTGCAGGTTTTGGTTAATATCTTAGAACACCCACAGTGTCGTGCTGATTACACATTGTCTTCTCACCAAGCTATTGAACCTCTTATCCCTTTGCTTGATTCTCCAATATCAGCAGTGCAACAGTTGGCAGCTGAGCTTCTCTCACATCTTCTTTTAGAAGAACACCTTCAGAAAGATCCAGTAACACAGCATGTAATTGGCCCTCTTATACGAGTTCTTGGTTCTGGTATACATATATTGCAACAGAGAGCTGTGAAGGCCCTGGTCAGTATTGCACTGCTATGGCCAAATGAAATTGCAAAAGAGGGTGGTGTTATTGAAATTTCAAAAGTTATATTGCAAGCAGATCCTTCCATTCCTCATGCTTTATGGGAATCAGCGGCGTCTGTTTTGGCTAGTATTCTGCAATTTAGTTCTGAATACTACCTGGAAGTTCCAGTTGCTGTTTTGGTTAGGCTGCTTAGATCTGGCTTAGAAAGCACAGTTGTTGGTGCATTAAATGCTCTCCTTGTGTTGGAAAGTGACGATGGAACTAGTGCCGAAGCAATGGCTGAAAGTGGTGCCATAGAGGCTCTCTTAGAGCTCCTAAGATCTCATCAGTGCGAGGAAACTGCTGCAAGACTCTTAGAAGCATTGCTGAACAATGTAAAGATCAGAGAAACAAAAGTTACTAAATCAGCCATCTTACCATTATCCCATTATCTCTTGGACCCACAAACCCAAGCACAACAAGCAAGGTTATTAGCAACATTGGCTCTTGGCGATCTATTTCAGAACGAGGGTCTTGCCCGGTCAAGTGATGCAGTTTCAGCTTGTCGTGCTTTAGTGAATGTGCTTGAAGACCAACCAACTGAAGAAATGAAAGTTGTAGCCATATGTGCTCTACAAAACCTTGTGATGAACAGTCGATCAAATAAAAGAGCAGTCGCAGAGGCTGGTGGGGTTCAGGTTATTCTGGATCTGATAGGTTCAAGTGATCCTGAAACATCTGTTCAGGCTGCAATGTTTATTAAACTTCTATTTTCAAATCATACCATCCAAGAGTATGCTTCTAGTGAAACAGTCAGAGCAATAACTGCTGCTATTGAAAAGGACTTATGGGCTACTGGAACTGTGAACGAAGAGTATCTTAAAGCCTTAAATTCTCTTTTTAGCAACTTCCCTAGACTGAGAGCAACTGAGCCAGCAACACTTAGCATTCCCCATCTGGTTACATCCTTAAAGACAGGCTCTGAGGCTACTCAGGAAGCTGCCTTGGATGCACTTTTCCTGCTTAGGCAAGCTTGGTCAGCATGTTCTGCAGAAGTTTCAAGAGCTCAATCAATAGCAGCTGCAGATGCTATTCCTTTGCTGCAGTATTTAATCCAGTCTGCCCCTCCTCGCTTTCAGGAGAAGGCAGAGTTTTTATTGCAGTGTTTGCCTGGAACTTTGGTGGTGATCATCAAGCGTGGTAACAATATGAAGCAATCTGTTGGAAACCCAAGTGTTTTTTGCAAGCTTACGCTTGGAAACACTCCTCCAAGGCAAACCAAGGTGGTCTCAACTGGCCCTAATCCGGAGTGGGAAGAGAGCTTTTCATGGTCCTTTGAGAGTCCTCCAAAAGGCCAGAAGCTTCACATATCTTGCAAAAACAAGAGCAAAATGGGAAAGAGTTCATTTGGGAAAGTGACAATCCAGATCGATCGGGTGGTAATGCTAGGAGCAGTATCTGGTGAGTACACTTTGTTGCCAGAAAGTAAGAGTGGCCCCTCGAGGAATTTAGAAATAGAATTCCAGTGGTCTAACAAGTGA 6303 0.4269 MEDPDGTLASVAQCIEQLRQSSSSMQEKEYSLKQLLELIDIRENAFSAVGSHSQAVPVLVSLLRSGSSNVKIQAATVLGSLCKQNELRVKVLLGGCIPPLLGLLKSSSAEGQVAAAKTIFAVSQGGAKDHVGSKIFSTEGVVPVLWEQLQKGLKTNVVDNLLTGALKNLSSSTDRFWNATIQAGGVDILIKLLKTGQSNTLANVCFLLGCMMMEDASVCSKLLTAEETKQLLKLLSPGNDAPVRAEAAGALKSLSAQCKDARKEIANSNGIPALINATIAPSKEFMQGEYAQALQENAMCALANISGGLSYVISSLGQSLESCSSPAQAADTLGALASALMIYDDNAESTRATDPLVVEQTLLEQFKPGLSFLVQERTIEALASLYSNPILSIKLANSDPKRLLVGLITMAANEVQDELLKSLLTLCNTECSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILESGSAKAKEDSASILRNLCDHSEDIRACVESADAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKAYVLDALKSMLSVVALTDLLREGSAASDAVDTMIKLLSSTEEETQAKSVSALAGIFEMRKDVRESSIAVKTLWSAMKLLNVESESILMESSRCLAAIFLSIKENRDVVAIARDALPSLVSLANSSVLEVAELATCAVANLILDSEIAEKAVAEEVILAATRVLREGTISGKSHAAAAIARLLHSKRQVDYAVTDCVNRAGTVLALVSFLDFAISGLSSTSEALEALAMLSRLEVNGAHSKPAWAVLAEFPKSISPIVLSITDSTPVLQDKAIEILSRLCKDQPFVLGDIVVSASGCISSIAKRIINSTSQNIKVKIGGVAVLICAAKVNHQRLVEDLNLSNLCGNLVQSLVDILISSQATLGYQRDDSRDVIRICRHTKEANDGKSSTGTTIISGANLAIWLLTVLACHDEKCKTTIMETGAIEFLSDRIANCFSLYSQIDYKEDSSMWICALLLAILFQDRDIIRAHATMKSIPALANLLKSEESANRYFAAQSIASLVCNGSRGTLLSVANSGAAGGLISLLGCADTDIQDLLELSEEFSLVHYPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPERPGAPFLALGLLTQLAIDCPSNKIVMVEAGALEALSKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFGAVTQLVAVLRLGGRAARYRAAKALESLFSSDHIRNAETARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSKALAVADVEMNAVDVLCRILSSDCSMDLKGDAAELCSVLFGNTRIRSTMAAARCVEPLVSLLVSEFGPSHHPVVRALDRLVDDEQLAELVAAHGAVIPLVGLLYGRNYVLHEAISRALVKLGKDRPACKMEMVKAGIIESILDILHEAPDYLCAAFAELLRILTNNASIAKGPPAAKVVEPLFMLLIRQDFGPDGQHSALQVLVNILEHPQCRADYTLSSHQAIEPLIPLLDSPISAVQQLAAELLSHLLLEEHLQKDPVTQHVIGPLIRVLGSGIHILQQRAVKALVSIALLWPNEIAKEGGVIEISKVILQADPSIPHALWESAASVLASILQFSSEYYLEVPVAVLVRLLRSGLESTVVGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEALLNNVKIRETKVTKSAILPLSHYLLDPQTQAQQARLLATLALGDLFQNEGLARSSDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMNSRSNKRAVAEAGGVQVILDLIGSSDPETSVQAAMFIKLLFSNHTIQEYASSETVRAITAAIEKDLWATGTVNEEYLKALNSLFSNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQAWSACSAEVSRAQSIAAADAIPLLQYLIQSAPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVFCKLTLGNTPPRQTKVVSTGPNPEWEESFSWSFESPPKGQKLHISCKNKSKMGKSSFGKVTIQIDRVVMLGAVSGEYTLLPESKSGPSRNLEIEFQWSNK* 2101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03718 2100 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 483 525 IPR000225 GO:0005515
Phac1g03718 2100 SMART arm_5 1430 1470 IPR000225 GO:0005515
Phac1g03718 2100 SMART arm_5 677 718 IPR000225 GO:0005515
Phac1g03718 2100 SMART arm_5 1388 1428 IPR000225 GO:0005515
Phac1g03718 2100 SMART arm_5 1679 1718 IPR000225 GO:0005515
Phac1g03718 2100 SMART arm_5 1514 1556 IPR000225 GO:0005515
Phac1g03718 2100 SMART arm_5 1347 1387 IPR000225 GO:0005515
Phac1g03718 2100 SMART arm_5 1260 1301 IPR000225 GO:0005515
Phac1g03718 2100 SMART arm_5 215 256 IPR000225 GO:0005515
Phac1g03718 2100 SMART arm_5 514 554 IPR000225 GO:0005515
Phac1g03718 2100 SMART arm_5 1133 1176 IPR000225 GO:0005515
Phac1g03718 2100 SMART arm_5 42 83 IPR000225 GO:0005515
Phac1g03718 2100 SMART arm_5 1178 1219 IPR000225 GO:0005515
Phac1g03718 2100 SMART arm_5 258 307 IPR000225 GO:0005515
Phac1g03718 2100 SMART arm_5 84 124 IPR000225 GO:0005515
Phac1g03718 2100 SMART arm_5 765 807 IPR000225 GO:0005515
Phac1g03718 2100 SMART arm_5 1806 1846 IPR000225 GO:0005515
Phac1g03718 2100 SMART arm_5 472 512 IPR000225 GO:0005515
Phac1g03718 2100 Gene3D - 599 816 IPR011989 -
Phac1g03718 2100 SUPERFAMILY ARM repeat 1135 1517 IPR016024 -
Phac1g03718 2100 SUPERFAMILY ARM repeat 13 152 IPR016024 -
Phac1g03718 2100 SUPERFAMILY ARM repeat 825 1108 IPR016024 -
Phac1g03718 2100 Gene3D - 402 598 IPR011989 -
Phac1g03718 2100 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1978 2097 IPR035892 -
Phac1g03718 2100 Gene3D - 827 1315 IPR011989 -
Phac1g03718 2100 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1145 1189 IPR000225 GO:0005515
Phac1g03718 2100 FunFam Coatomer beta subunit 1565 1978 - -
Phac1g03718 2100 Gene3D - 1746 1977 IPR011989 -
Phac1g03718 2100 CDD C2 1981 2071 - -
Phac1g03718 2100 Gene3D - 5 365 IPR011989 -
Phac1g03718 2100 Gene3D - 1316 1622 IPR011989 -
Phac1g03718 2100 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1329 1563 - -
Phac1g03718 2100 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 1 2100 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Phac1g03718 2100 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1774 1817 IPR000225 GO:0005515
Phac1g03718 2100 Gene3D C2 domain 1978 2100 IPR035892 -
Phac1g03718 2100 Pfam C2 domain 1979 2075 IPR000008 -
Phac1g03718 2100 SUPERFAMILY ARM repeat 1572 1977 IPR016024 -
Phac1g03718 2100 SUPERFAMILY ARM repeat 561 900 IPR016024 -
Phac1g03718 2100 SMART C2_3c 1980 2076 IPR000008 -
Phac1g03718 2100 Gene3D - 1630 1745 IPR011989 -
Phac1g03718 2100 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1979 2100 - -
Phac1g03718 2100 Coils Coil 244 264 - -
Phac1g03718 2100 SUPERFAMILY ARM repeat 164 556 IPR016024 -
Phac1g03718 2100 ProSiteProfiles C2 domain profile. 1962 2077 IPR000008 -
Phac1g03718 2100 Pfam Armadillo/beta-catenin-like repeat 472 512 IPR000225 GO:0005515
Phac1g03718 2100 Pfam Armadillo/beta-catenin-like repeat 52 82 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03718 Phac-Chr1 42265591 42276085 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03718 435 567 U-box Gene Family AT2G23140 40.741 3.96e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03718 - - gmx:100816765 3718.32