Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03712 ATGAGACCTCTCGCAAAGCTCTTTCACAAGTTTTGTGGGGAAATTGTAATCCTATTAGCATCCATCATAATAGAACTTATCATTCTCATTCAGAAACTAAAATCATCCTCGTCAAGTCCCATCAGCACCCACCAATACCTCAAATTCATCGAGAAGAACAACCCCACGATTTGCTACACCAAAAGGTTGCTGAAGGCAGAACAGGGTTGTGGTGCAGAGTGCAGAGTATGCTTGTGCGAATTGGAGGAAGGGGAGAAGGTGAGGAAGTTGCAATGCCATCACATGTTTCACAGGGATTGTTTGGACAAGTGGTTGCAACAATATTGGGCTACGTGCCCTCTTTGTAGGAAGCAAGTGGTGCCGCCTGATGTTGTGTTGAAGCACCGTCAGCATCAGAGTCAAGCAGAGGAACAAGGTTTTGATGGGAATCATGAAGACAACCTTCTCTATTTTTTATCAGCATTTCGTCGTGGCAACACTCTGCATAGATACTTCTGA 498 0.4458 MRPLAKLFHKFCGEIVILLASIIIELIILIQKLKSSSSSPISTHQYLKFIEKNNPTICYTKRLLKAEQGCGAECRVCLCELEEGEKVRKLQCHHMFHRDCLDKWLQQYWATCPLCRKQVVPPDVVLKHRQHQSQAEEQGFDGNHEDNLLYFLSAFRRGNTLHRYF* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03712 165 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 30 122 IPR013083 -
Phac1g03712 165 PANTHER - 1 159 - -
Phac1g03712 165 SUPERFAMILY RING/U-box 54 122 - -
Phac1g03712 165 ProSiteProfiles Zinc finger RING-type profile. 74 116 IPR001841 -
Phac1g03712 165 SMART ring_2 74 115 IPR001841 -
Phac1g03712 165 Pfam Ring finger domain 73 116 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03712 Phac-Chr1 42224240 42225345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03712 72 130 C3H Transcription Factor Family AT1G15100 52.542 2.06e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03712 K16282 - gmx:102661897 202.986