Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac1g03708 | ATGAATTCAGCATCCCCACAGTTCGTTTCCGCAAGAAGGATGAGTGTGTACGATCCAATCCACCAGATTAGTATGTGGGGAGAAGGCTTCAAAAGTAATGGTAATTTAAGTGCTTCCATGCCTTTAATAGATGAGGCAGACATGAAGTTAGATAGTCAGTCAGAGGATGCTTCTCACGGTATTCTGGGAGCACCTAACAAGTATGATCAAGAAGCTAACAAACCTACTGATAAGATACAAAGACGTCTTGCACAAAATCGAGAGGCTGCTCGTAAGAGCCGTTTGAGGAAAAAGGCCTATGTGCAGCAGTTAGAATCAAGTCGTTTGAAGTTGATGCAGTTGGAGCAAGAGCTCGAACGTGCAAGACAGCAGGGAATGTACATAGGTGGTGGGTTGGACTCTAATCATATGGGTTTTGCTGGATCGGTAAATTCAGGAATTACAACCTTTGAGATGGAGTACGGGCACTGGGTGAACGAGCAAAATAGGCAAATCACAGAACTGAGAACTGCTTTAAATGCTCATATTGGTGACATAGAACTCAGGATTCTAGTAGATGGTATGATGAACCACTACGCTGCAATCTTTCGCATGAAATCTGCTGCCGCAAAAGCAGACGTGTTCTATGTCATGTCTGGAATGTGGAAAACAACAGCTGAAAGATTTTTCCTGTGGATCGGAGGCTTTCGCCCCTCTGAGCTTCTAAAGGTTCTTGGGCCCCTGATTGAACCCCTCACAGAGAAACAACGGTTGGATATCTATAACCTAGGACAATCATGTCAGCAAGCAGAAGATGCCCTATCACAAGGTATGGACAAACTCCGGCACACACTAGCTGATAGTGTAGCAGCTGGACAGTTCATGGAGGGAACCTACATTCCACAGATGACTTCTGCAATGGAGAAGTTGGAAGCTCTGGTGAGCTTTGTGAACCAGGCTGACCATCTTCGGCAGGGAACCTTGCAGCAGATGTCTCGAATACTTACAATCCGTCAGGCGGCTCGGTGCTTGCTTGCTTTGGGAGAATATTTCCAACGCCTGAGGGCTTTGAGCTCACTGTGGTCTAACAGACCCCGTGAACCTGCTTAG | 1089 | 0.4628 | MNSASPQFVSARRMSVYDPIHQISMWGEGFKSNGNLSASMPLIDEADMKLDSQSEDASHGILGAPNKYDQEANKPTDKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLMQLEQELERARQQGMYIGGGLDSNHMGFAGSVNSGITTFEMEYGHWVNEQNRQITELRTALNAHIGDIELRILVDGMMNHYAAIFRMKSAAAKADVFYVMSGMWKTTAERFFLWIGGFRPSELLKVLGPLIEPLTEKQRLDIYNLGQSCQQAEDALSQGMDKLRHTLADSVAAGQFMEGTYIPQMTSAMEKLEALVSFVNQADHLRQGTLQQMSRILTIRQAARCLLALGEYFQRLRALSSLWSNRPREPA* | 363 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac1g03708 | 362 | Gene3D | - | 77 | 126 | - | - | |
Phac1g03708 | 362 | SUPERFAMILY | Leucine zipper domain | 78 | 120 | IPR046347 | GO:0003700|GO:0006355 | |
Phac1g03708 | 362 | ProSiteProfiles | DOG1 domain profile. | 147 | 357 | IPR025422 | GO:0006351|GO:0043565 | |
Phac1g03708 | 362 | Pfam | bZIP transcription factor | 76 | 112 | IPR004827 | GO:0003700|GO:0006355 | |
Phac1g03708 | 362 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 3 | 360 | - | - | |
Phac1g03708 | 362 | Pfam | Seed dormancy control | 164 | 238 | IPR025422 | GO:0006351|GO:0043565 | |
Phac1g03708 | 362 | CDD | bZIP_HBP1b-like | 78 | 130 | - | - | |
Phac1g03708 | 362 | SMART | brlzneu | 74 | 134 | IPR004827 | GO:0003700|GO:0006355 | |
Phac1g03708 | 362 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 76 | 120 | IPR004827 | GO:0003700|GO:0006355 | |
Phac1g03708 | 362 | Coils | Coil | 97 | 124 | - | - | |
Phac1g03708 | 362 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 81 | 96 | IPR004827 | GO:0003700|GO:0006355 | |
Phac1g03708 | 362 | FunFam | BZIP family transcription factor | 77 | 126 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac1g03708 | Phac-Chr1 | 42191378 | 42197367 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac1g03708 | 1 | 362 | Calmodulin-binding Proteins | AT5G10030 | 70.330 | 0.0 | 527 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Phac1g03708 | DOG1 | 7e-31 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac1g03708 | K14431 | - | gmx:100793353 | 681.019 |