Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03693 ATGGTTTCTAAAGAGCAAAAGAGAGCAGCACTGCATGAGAAGCTGCAACTACTTCGTTCTCTTACTAACTCTCATGCCCTAAACAAAACCTCGATCATAATGGATGCGTCAAAGTACATCCAAGAGTTAAAGCAAAAGGTGGAAGAATTGAATCAAGACGTAGCCAATGCACAGACTTCAACCGACCAAAATTCTTTGCCCATGGTTACAGTAGAAACCACGGAAAAGGGTTTTCTTATTAATGTTTTTTCAGCAAAGAGTTGCCCTGGTCTGTTTGTTTCCATATTGGAGTCATTTGAAGAGATGAGTCTTAACGTGCTTGAAGCTAGGGCTACTTGTATCGACACGTTTCGATTTCATGCTGTTGGAGAAAAGAATGAAGAACAAGGTAAGAATATTGATGCAGGAGCAGTGAAACAGGCAATCGGACAAGCAATAAAGAATTGGAGCCAAAATGCTGACTAA 465 0.4043 MVSKEQKRAALHEKLQLLRSLTNSHALNKTSIIMDASKYIQELKQKVEELNQDVANAQTSTDQNSLPMVTVETTEKGFLINVFSAKSCPGLFVSILESFEEMSLNVLEARATCIDTFRFHAVGEKNEEQGKNIDAGAVKQAIGQAIKNWSQNAD* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03693 154 Coils Coil 33 60 - -
Phac1g03693 154 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 4 150 - -
Phac1g03693 154 Gene3D - 3 66 IPR036638 GO:0046983
Phac1g03693 154 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 64 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03693 Phac-Chr1 42113444 42115485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03693 1 100 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 27.273 1.00e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03693 - - gmx:100814138 256.144