Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03663 ATGCTTTTAAGCTTTTACTCCCAAACCAAGCAAGGAATCTGTAATCAAATGGCTGGGAATTCTCCATGTGCTTCATGCAAGCTGCTGAGACGCAGGTGTACCAAGGACTGCATCTTTGCTCCTTATTTCCCTTCCAATGACCCTCAAAAGTTCGCCTTAGTTCACAAGGTTTTTGGCGCTAGCAATGTTAGCAAAATGCTGCAGGAACTTCCTATTCAGCAGAGAGCAGATGCTGTGAGTAGTTTGGTGTATGAAGCACATGCAAGAGTTCGGGACCCTGTGTATGGTTGTGTTGGGGCCATATCCTATTTACAAAACCAGGTTTCTGAGCTTCAAATGCAGCTTGCAGTGGCTCAAGCAGAGATACTCTGCATCCAGATGCAACAGGAGCCTGTGATGCCAAATCCAGAAATGGAAAACCCAGATCACAAATCTTACCTTCTCCACAATGAACTCCCTCAGTTTCTCAACTATGCCTCTTCTAGCAATGTAATTTATGATGCTGTCACAAGAGAGAGCATTTATGGACATGATTTGGTTTCCTGA 546 0.4432 MLLSFYSQTKQGICNQMAGNSPCASCKLLRRRCTKDCIFAPYFPSNDPQKFALVHKVFGASNVSKMLQELPIQQRADAVSSLVYEAHARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQQEPVMPNPEMENPDHKSYLLHNELPQFLNYASSSNVIYDAVTRESIYGHDLVS* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03663 181 Coils Coil 101 121 - -
Phac1g03663 181 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 19 138 - -
Phac1g03663 181 Pfam Lateral organ boundaries (LOB) domain 22 119 IPR004883 -
Phac1g03663 181 ProSiteProfiles LOB domain profile. 21 122 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03663 Phac-Chr1 41932424 41933389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03663 19 148 AS2 family AT2G30130 79.104 4.07e-73 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac1g03663 LOB 3.5e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03663 - - gmx:121173085 300.827