Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03649 ATGAAGGGTTATGAGCCCCGTTCAAGCTCTTCATGTGCAGCTTGCAAGTTATTGAAGAGAAGATGCGTACCCAATTGTATTTTTGCACCTTACTTCAGGTCTGATGAGTGTAAGAAGTTTGCCAAGGTGCACAAGGTATTTGGAGCCAGCAATGTGAGCAAGATCTTGATCGAAGTCTCAGAAGAGCAGAGGGAGGACACGGTGAATTCTCTGGCATATGAGGCTGAGGCAAGGCTGAGAGACCCTGTTTATGGATGCATTGGTGCCATAGCTCTCTTGCAGAGGAAGATGGTGGAGCTTCAACATGATCTCGCCATTGCTAAGGATCGTCTAGCACGTTGTCACGCTGCAGCCACTGTTCTCCCTTCTCCTGATATCTTGCATGCCCATGTTAGCCTCCCTCCATTCCCTGACTTTTGCACTTCCTCCAATGATTTCAATGATATCTTCTGCCACAGTTCATCATCCCAATTATTGAGCCGCCATGAAACGGTGGACGATTTCAATCAAATCCCATATATATTTTAG 528 0.464 MKGYEPRSSSSCAACKLLKRRCVPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVSEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARCHAAATVLPSPDILHAHVSLPPFPDFCTSSNDFNDIFCHSSSSQLLSRHETVDDFNQIPYIF* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03649 175 Coils Coil 90 110 - -
Phac1g03649 175 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Phac1g03649 175 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Phac1g03649 175 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03649 Phac-Chr1 41844714 41846842 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03649 1 111 AS2 family AT3G11090 80.180 5.54e-63 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac1g03649 LOB 1.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03649 - - gmx:100791250 343.199