Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03631 ATGGCTTCCAGAGGAACTGGAACTCTGATTTGGGTGTGTCTGTTATGGCTTTTCTTCCTCTGCGCCACCATTGCTTTCTTTCAACTCCACTTGGTAGACAACAGAAGCAATCAACCTTCCTCTCGCAGTAATCTCATCAAGACTCAACAGCTTTCAGATACCCCTTTGGGACAGGATTCGGAGGGTGTCACTCACAAGGTGTATTTTGATATAGAGATCCATGGGAAATTAGCGGGTCGCATAGTCATCGGCCTTTTTGGGAACACAGTTCCGAAAACTGTAGAAAACTTTCGAGCGCTTTGTACTGGAGAGAAAGGAAAGGGAAGAAGTGGGGAGTCTCTTCATTATAAAGGAAGCACATTCCACAGGATTATACCAAGCTTTATGGTCCAGGGTGGTGATTTCACCCGTGGTGATGGAAGAGGTGGAGAATCAATCTATGGTGATAAGTTTGCTGATGAAAACTTCAAGCTGAAGCATTCTGGACCAGGATACTTATCTATGGCGAATTCAGGGCAAGACACCAATGGCTCCCAGTTTTTCATAACCACAGTTAAAACTAGCTGGCTGGATGGACGCCATGTTGTATTTGGCAAGGTACTTTCTGGTATGGACGTACTGTACAAGATTGAAGCAGAAGGAAGTGAAAGTGGCTCGCCTAAGAACAAGGTCGTCATATCAGACAGTGGAGAATTAACTTCTTGA 705 0.4482 MASRGTGTLIWVCLLWLFFLCATIAFFQLHLVDNRSNQPSSRSNLIKTQQLSDTPLGQDSEGVTHKVYFDIEIHGKLAGRIVIGLFGNTVPKTVENFRALCTGEKGKGRSGESLHYKGSTFHRIIPSFMVQGGDFTRGDGRGGESIYGDKFADENFKLKHSGPGYLSMANSGQDTNGSQFFITTVKTSWLDGRHVVFGKVLSGMDVLYKIEAEGSESGSPKNKVVISDSGELTS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03631 234 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 116 133 IPR020892 GO:0003755|GO:0006457
Phac1g03631 234 SUPERFAMILY Cyclophilin-like 63 232 IPR029000 -
Phac1g03631 234 Gene3D - 56 234 IPR029000 -
Phac1g03631 234 MobiDBLite consensus disorder prediction 220 234 - -
Phac1g03631 234 MobiDBLite consensus disorder prediction 36 58 - -
Phac1g03631 234 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 66 232 - -
Phac1g03631 234 FunFam Peptidyl-prolyl cis-trans isomerase 60 233 - -
Phac1g03631 234 CDD cyclophilin_ABH_like 65 230 - -
Phac1g03631 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 179 191 IPR002130 GO:0000413|GO:0003755
Phac1g03631 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 85 100 IPR002130 GO:0000413|GO:0003755
Phac1g03631 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 192 207 IPR002130 GO:0000413|GO:0003755
Phac1g03631 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 164 179 IPR002130 GO:0000413|GO:0003755
Phac1g03631 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 133 IPR002130 GO:0000413|GO:0003755
Phac1g03631 234 MobiDBLite consensus disorder prediction 215 234 - -
Phac1g03631 234 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 68 231 IPR002130 GO:0000413|GO:0003755
Phac1g03631 234 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 69 228 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03631 Phac-Chr1 41689827 41693017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03631 79 229 U-box Gene Family AT5G67530 44.444 1.03e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03631 K01802 - gmx:100792649 420.239