Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03629 ATGACTAACTACTATGATATTGATGATATTGTTATGGAGGAAGGGACTGTGTCAGTTATATTTCAGAAAGCTGCATCTGGAGTTGGAATAGATCCCAGTTCTGTAATGGACTTTATTGAAACAGGTTCAAAAGTTGAATTGCCGTTTTGGCTTGCTCATGAGTTACAGATGAGACAGGCAGTATCAGTCAACGTTCCCTCTTGTTTTGATCAAAAAACAAGGCTAGAGATCCAAGCTGATTCGGCCGGTGTGGATCTGAGGTCCAGATGTCCATTCTTTTATGATTTTGGTTGCAAGATAGCACCCATAGTTGGCGACCGAACCATTGGGTTTCTGCTGTTGTCTGCTTTTAAAAGTAGGTATAAGGAAATTCTCACGAAGGCACATTCAGTAGCATTTCCCGCTGGTTCCAAATTTTGGACTATTCTTACAAAAGAAGAGATCAACTTGTATGAGACCGCTCAATCCGCAATGGCATCCTTCAAGAAGTGGCGAATGGGAGGGCCCAGATTTCAGATAGCTTCTGTTCTGGGAAAAAAGAGAAAATCCACTGAATAG 558 0.4176 MTNYYDIDDIVMEEGTVSVIFQKAASGVGIDPSSVMDFIETGSKVELPFWLAHELQMRQAVSVNVPSCFDQKTRLEIQADSAGVDLRSRCPFFYDFGCKIAPIVGDRTIGFLLLSAFKSRYKEILTKAHSVAFPAGSKFWTILTKEEINLYETAQSAMASFKKWRMGGPRFQIASVLGKKRKSTE* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03629 185 Gene3D - 1 167 IPR038437 -
Phac1g03629 185 Pfam GINS complex protein 45 148 IPR021151 -
Phac1g03629 185 CDD GINS_B_Psf3 4 66 - -
Phac1g03629 185 SUPERFAMILY PriA/YqbF domain 1 66 - -
Phac1g03629 185 CDD GINS_A_psf3 61 167 - -
Phac1g03629 185 PANTHER UNCHARACTERIZED 1 184 IPR010492 -
Phac1g03629 185 SUPERFAMILY GINS helical bundle-like 65 166 IPR036224 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03629 Phac-Chr1 41682046 41685875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03629 1 184 Core DNA Replication Machinery Family AT3G55490 64.674 1.61e-91 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03629 K10734 - gmx:100799874 330.487