Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03620 ATGGCCGCCATCGCCGCCACCTCATCATACCTCTTCGGCACCCGTCTCTACAGCCCGACAACCTTAAACACTGGAAGATTCCACGCGCTCTTCAACTTCGGCACCAAGAAGACGCCGCCACCGCCAAAGAAAAAGGAAGTGAAAGTGAAACCCGTCTCCGGCGACCGGCTGGTGTGGTTCCCGAAGGCGGAGCCGCCGGAGTGGCTCGACGGAAGCATGATCGGCGACCGCGGGTTCGATCCGTTTGGGTTTGCAAAGCCCGCGGAGTACCTGCAGTTCGACCTGGACTCGCTGGACCAGAACCTCGCGAAGAACCTCGCTGGCGACGTGATAGGAACAAGGGTGGAGGTCGCAGAGGTCAAACCGACGCCGTTTCAGCCCTACACGGAGGTTTTCGGGATTCAGAGGTTCCGCGAGTGCGAAGTCATTCACGGAAGGTGGGCAATGCTGGGTGCACTCGGTGCTTTGGCCGTTGAGGCTCTCACCGGAGTCGCATGGCAAGACGCCGGAAAGGTAGAGCTGGTGGAAGGATCATCTTACTTGGGACTTCCACTTCCATTTTCAGTGAGCACACTGATATGGATCGAGGTGATAGTGATAGGATACATAGAGTTTCAAAGAAATGCAGAACTTGACCCAGAGAAAAGGTTGTACCCAGGAGGCAAGTTCTTCGATCCTCTGGGTTTGGCCGTCGACCCTGATGAAAAAGCCAGACTTCAACTTGCAGAGATCAAGCATTCCCGGTTGGCCATGGTCGTCTTCCTCATCTTTGCCATTCAAGCTGCTGTAACAGGAAAAGGCCCTATCAGTTTTATTGCTACCTTCAACAAGTGA 834 0.5492 MAAIAATSSYLFGTRLYSPTTLNTGRFHALFNFGTKKTPPPPKKKEVKVKPVSGDRLVWFPKAEPPEWLDGSMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNLAGDVIGTRVEVAEVKPTPFQPYTEVFGIQRFRECEVIHGRWAMLGALGALAVEALTGVAWQDAGKVELVEGSSYLGLPLPFSVSTLIWIEVIVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAVDPDEKARLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFIATFNK* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03620 277 Pfam Chlorophyll A-B binding protein 65 261 IPR022796 -
Phac1g03620 277 SUPERFAMILY Chlorophyll a-b binding protein 55 274 - -
Phac1g03620 277 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 36 273 IPR001344 GO:0009765|GO:0016020
Phac1g03620 277 Gene3D Chlorophyll a/b binding protein domain 57 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03620 Phac-Chr1 41600955 41603582 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03620 11 274 Chloroplast and Mitochondria Gene Families AT3G08940 72.727 1.02e-138 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03620 K08915 - gmx:100820335 475.322