Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03602 ATGGAAGAGGGCATGTCAGATTTTTGTTTCAGAGGTGAAAATGTTGGTTGTAATAGAGGTAGTGGTAGTGGTACCAAGTGTGGGCGTTGGAATCCCACAACTGAGCAAGCTAAGGTTCTGACTCAACTGTTCAGTTGTGGACTCCGCAACCCAAGCATTGATCAGATTCAAAAGATCTCTAATCAGCTCAGTTTTTATGGTAAGATTGAGAGCAAAAATGTGTTCTATTGGTTTCAGAACCATAAGGCCAGGGAAAGACAAAAGCGTCGCAAGGTTGATAGGGATGTGATTCGTAGTGAAAACTCTATCTCCATGAATTTTTTCACACAAAATTTTACGCAACTATTTGAGGTTTCTGAGACTGAGAAAGTCACTGAGACCCTTCAACTGTTCCCCCTGAACTCTTTTTGTGAATCAGAATCAAAGAATATGAGGGTTCATGCAAGTGACTGCAGGAATAATACAGTGTTTTCATTCACAGAGGAGGAACAAATTAATCATCCACCATTAGATCTTCGCTTGAGTTTCACGTGA 534 0.4064 MEEGMSDFCFRGENVGCNRGSGSGTKCGRWNPTTEQAKVLTQLFSCGLRNPSIDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQKRRKVDRDVIRSENSISMNFFTQNFTQLFEVSETEKVTETLQLFPLNSFCESESKNMRVHASDCRNNTVFSFTEEEQINHPPLDLRLSFT* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03602 177 ProSiteProfiles 'Homeobox' domain profile. 23 88 IPR001356 GO:0003677
Phac1g03602 177 CDD homeodomain 29 89 IPR001356 GO:0003677
Phac1g03602 177 Gene3D - 26 93 - -
Phac1g03602 177 FunFam WUSCHEL-related homeobox 11 26 94 - -
Phac1g03602 177 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 18 95 IPR044555 GO:0003700|GO:0099402
Phac1g03602 177 SMART HOX_1 25 92 IPR001356 GO:0003677
Phac1g03602 177 Pfam Homeodomain 27 87 IPR001356 GO:0003677
Phac1g03602 177 SUPERFAMILY Homeodomain-like 28 90 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03602 Phac-Chr1 41525522 41526166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03602 8 176 Wox Gene Family AT3G11260 53.226 1.77e-56 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phac1g03602 Homeodomain 1.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03602 - - gmx:100791433 289.271