Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03600 ATGGTCCTCTTTTCCACAGAAACAAGAGTTTGGAGAACACATTCGTTTTTGTTACATACAAAAATGTCTTCTCCATCTTCTCCTTGTGATTCAGTCACAGTGATTTCAAAATGCAAAGTTGTCCCTCAGAAGAACTCCACTGTGGGAGATCTTAAACTCTCAATCTCAGACCTTAACATGCTCTTATGTCACTACATCCAAAAGGGGTGTCTCTTCACCACCCCATCTCTCCCCTCTCAAGCTCTCATCCCTCATCTCACCAAAGCACTATCTCACACACTCTCCCTTTTTCCTCCCTTTGCAGGTCGCCTCAAAACTGATGTTGACGGCTACGTCTACATCACATGCAACGACGCTGGCGTCGATCTCTTCCACGCCACCGCCATTCATATCTCCGTCGCCGACCTCCTCTCATCGTCCGATGTTCATCCAACCGTCAAGCACCTCTTCCCTTTCCACCACAAAATTAGCTACGCAGCTCACTCTTCCCCTATCATGGCCTTTCAGGTCACCGAGCTCGCTGACGGCGTTTTCGTCGGTTGTGCTGTCTGTCACGCCGTCACCGACGGTGCCTCCTTCTGGAACTTCTTCAACACTTTCGCCGCCATTTCGCGAGGAGAAACCGCTTGTCCCTCTAAGCTCCCGGATTTTCGTCGGGACTCCATCCTCTCCTCGAAGGTCGTGCTTCGACTGCCAAAAGAAATCAAGGTCACCTTCAATGTTGACGCGCCGTTTCGCGAGAAAATTTTCAGTTTCAGCCGTGAATCAATTCAGAAGCTGAAAGCCTCGGTGAACAGCAGTAGGAAAATGTTTACGGCGGAGAACGTTGATGTGGCGGATGAGTTGACGGCGAAGCTGAACGCTGACACACAACTGAAAACAGCTACCGAAGGCGTAAGGGGTGAAAGAACAGAGATTTCTTCGTTCCAATCGTTGTGCGCACTGATGTGGAAGGTGGTGACGAGGGCGAGGAATATGGAGAAGTCTAAAGTGACGTCGTTTCGAACGGCAGTTAATATTCGGAAACGCATGAAGCCCGAGTTGGAGGACTGTTACTTCGGAAATGCGCTTCAGAGCATCACCACGTGTGCTAAAGTGGGTGATGTGGTGTTGAAGGACCTTCCATGGTGCGCAGAGCAACTGAATAGGAGCGTGAAGGCGTTTGATAGCGCTACGGTGCAGCGTAATGTGGAGAATTGGGAGCGTGATCCCAAGTGCTACGAGTTAGGGAACCATGACGGCGCCACAGTGCAGATGGGAAGCTCGCCAAGATTTCCGATGTATGACAACGATTTTGGATGGGGGCGGCCCATAACTGTGCGGAGCGGCGGAGCAAACAAGTTTGACGGTAAGTTGTCGGCGTTTCCGGGGAGTAATGGCGGTGGCAGCGTCGATGTGGAGGTGGTTTTGGCGCCTGAAACAATGGCGCAACTGGAGTCCGATCCTGAATTCATGGTTTACGTGTCTGCACAAAGCGTAGGGACTCGTGTTTGA 1494 0.5107 MVLFSTETRVWRTHSFLLHTKMSSPSSPCDSVTVISKCKVVPQKNSTVGDLKLSISDLNMLLCHYIQKGCLFTTPSLPSQALIPHLTKALSHTLSLFPPFAGRLKTDVDGYVYITCNDAGVDLFHATAIHISVADLLSSSDVHPTVKHLFPFHHKISYAAHSSPIMAFQVTELADGVFVGCAVCHAVTDGASFWNFFNTFAAISRGETACPSKLPDFRRDSILSSKVVLRLPKEIKVTFNVDAPFREKIFSFSRESIQKLKASVNSSRKMFTAENVDVADELTAKLNADTQLKTATEGVRGERTEISSFQSLCALMWKVVTRARNMEKSKVTSFRTAVNIRKRMKPELEDCYFGNALQSITTCAKVGDVVLKDLPWCAEQLNRSVKAFDSATVQRNVENWERDPKCYELGNHDGATVQMGSSPRFPMYDNDFGWGRPITVRSGGANKFDGKLSAFPGSNGGGSVDVEVVLAPETMAQLESDPEFMVYVSAQSVGTRV* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03600 497 Gene3D - 235 480 IPR023213 -
Phac1g03600 497 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 34 485 - -
Phac1g03600 497 Pfam Transferase family 31 485 - -
Phac1g03600 497 Gene3D - 31 234 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03600 Phac-Chr1 41512156 41514413 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03600 56 479 Monolignol Biosynthesis Gene Families AT5G48930 28.506 2.05e-36 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03600 - - vum:124828482 861.292