Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03599 ATGGTAACAATGTCTTCTTCTTCTTCTTCTTCTTGTGAGGATGCCATCACTGTCCACTCAAAATGCAGTGTTGTGCCTCACCAAAGTTCCACTCTAGGAGATCTTAAGCTCTCTATCTCAGACCTTAACATGCTCCTCTCTCACTACATTCAAAAGGGGTGTCTCTTCACCACCCCATCTCTCCCCTCTCACACTCTCATCCCTCACCTCATCAACGCGCTTTCTCGCACGCTCTCCTTTTTCCCTCCCTTCGCTGGTCGTCTCAAAACTGACCATCATGGCTACGTCTACATCGCATGCAACGATGCAGGCGTCGAATTCACCCACGCCACCGCTCTTCATATCTCCCTTGCCGACCTCCTGTCACCGTCCCATCTTCATCCGACCTTCAACCACCTCTTTCCTTTCCACCACAAAATCAGTTACACCGCTCATTCCTCCCCTATCATGGCCTTTCAGGTCACCGAGCTCGCTGACGGCGTTTTCATCGGTTGTGCCGTTTGCCACGCTGTCACCGACGGAGCCTCCTTCTGGAACTTCTTTAACACCTTCGCTGCAGTTTCTCAAGGAGCAACCGTATGTCCCTCCAGGCTCCCGGATTTTCGCCGCGATTCCATCCTCACCTCCAAGATTCTGCTTCGGCTGCCAAAAGAAATCAAGGTGACCTTCAACGTTGACGCACCCTTTCGCGAGAGAATCTTCAGCTTCAGCCGTGAGTCAATTCAGAAGCTGAAAGCCGTGGCGAATAATGGTGGGAAACTTTGTTTGTTGGAGAATGTTGAGTTGATGGGGAAGCTGAGCCACGACACACAGGTGAAAACGGTTACTAGAGGCAGAACTAACGAAACGGCAGAGATTTCATCGTTTCAATCTTTGTGTGCGCTGATGTGGCGGTCCGTTACAAAGGCGAGGAATCTGGAAGGGCCTCAAGTGACGACGTTTCGAATGGCAGTTAATGTTCGGCAACGCATGGAGCCGAAGTTGGGAGATCATTACTTTGGAAACGCGATTCAAAGCATTGCCGCGTGTGCAACAGCAGGTGACCTGGTATCCAGCGATCTTCGATGGTGCGCGGAACTACTGAACAAAAGTGTGAAGGCGTTCGACAGCGATACAGTGCGCCGCAATGTGGAGAATTGGGAGCGTGAGCCAAAGTGTTTTGAGTTGGGAAACCACGACGGCGCCACTTTGCAGATGGGAAGCTCACCCAGATTTCCGATGTATGAAAATGATTTTGGATGGGGGCGGCCCTTGGCTGTGCGGAGCGGTGGAGCCAACAAGTTTGACGGCAAAATGTCGGCGTTTCCCGGGAGGAATGGCGGCGGTAGCGTTGATTTGGAAGTGGTTTTGGCGCCTGACACAATGGACCAACTTCACTCTGATCCCGAGTTCATGTTTTATGTGTCCGGTTAG 1413 0.5166 MVTMSSSSSSSCEDAITVHSKCSVVPHQSSTLGDLKLSISDLNMLLSHYIQKGCLFTTPSLPSHTLIPHLINALSRTLSFFPPFAGRLKTDHHGYVYIACNDAGVEFTHATALHISLADLLSPSHLHPTFNHLFPFHHKISYTAHSSPIMAFQVTELADGVFIGCAVCHAVTDGASFWNFFNTFAAVSQGATVCPSRLPDFRRDSILTSKILLRLPKEIKVTFNVDAPFRERIFSFSRESIQKLKAVANNGGKLCLLENVELMGKLSHDTQVKTVTRGRTNETAEISSFQSLCALMWRSVTKARNLEGPQVTTFRMAVNVRQRMEPKLGDHYFGNAIQSIAACATAGDLVSSDLRWCAELLNKSVKAFDSDTVRRNVENWEREPKCFELGNHDGATLQMGSSPRFPMYENDFGWGRPLAVRSGGANKFDGKMSAFPGRNGGGSVDLEVVLAPDTMDQLHSDPEFMFYVSG* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03599 470 Pfam Transferase family 16 465 - -
Phac1g03599 470 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 19 465 - -
Phac1g03599 470 Gene3D - 229 462 IPR023213 -
Phac1g03599 470 Gene3D - 16 221 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03599 Phac-Chr1 41499789 41501808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03599 40 468 Monolignol Biosynthesis Gene Families AT5G48930 27.602 3.49e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03599 - - vum:124828482 735.717