Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03595 ATGGAATTGGAGACCCCATATCCAAGTTGTTTTATGTCAAATTCAAATTGGTTTGTTCAAGAAAGTGACTACACAGAATGGACGAGAGAAGAGAATAAGAAGTTTGAAAGTGCCCTTGCCATATATGACAAGGATACCCCAGACAGATGGGTGAGGGTTGCAGCCATGCTCCCGGGAAAAAGTGTCTATGATGTGATGAAACAGTACAGGGAATTGGAAGAAGATGTTAGTGAAATAGAAGCAGGGAGGATTCCAGTTCCTGGATATCTTACCTCTTGTTTCTCATTGGAGATGGTTGACAACCAATGTTATGGTGCATGCAGAAAGAAGCCTGCAACTGTCAGGAGTTCTGATCAGGAGAGGAAGAAAGGGGTCCCTTGGACAGAAGAGGAACACAGACGTTTTTTGATGGGACTTTTAAAGTATGGTAAAGGGGACTGGAGAAATATTTCTCGCAAATTTGTGGTGACAAAGACTCCCACCCAAGTGGCAAGCCATGCTCAAAAGTATTACATAAGGCAAAAGCTTTGTGGAGGGAAAGACAATAAGAGGAGGCCTAGTATCCATGATATCACCATTATTAATCTTACATCAGACCAAGAGAAGTTCAATGAATCACACATGCCCTCAGAGAAACTGAAGATGAATAGCATGACAAAACTACAACTTGAATGGATTAATCGCCACAACAATACTGCTTCACTTATGGTTTTCAACCCAAATTATGAGATGTTGATGTCACCTTCATCTGGCACCATATCTCCCAAGACCCTCAAGTTGGGTCAGGATTTCTATGAATGTGCTTTCCATGAGACTTATGCCAAGCTTAAAAATCCAGCTTTCAGGACAGCTTCTAGAGACTTCAACAAGGAAGCTATTTTTGGTATTCATGCACTGTAA 900 0.4144 MELETPYPSCFMSNSNWFVQESDYTEWTREENKKFESALAIYDKDTPDRWVRVAAMLPGKSVYDVMKQYRELEEDVSEIEAGRIPVPGYLTSCFSLEMVDNQCYGACRKKPATVRSSDQERKKGVPWTEEEHRRFLMGLLKYGKGDWRNISRKFVVTKTPTQVASHAQKYYIRQKLCGGKDNKRRPSIHDITIINLTSDQEKFNESHMPSEKLKMNSMTKLQLEWINRHNNTASLMVFNPNYEMLMSPSSGTISPKTLKLGQDFYECAFHETYAKLKNPAFRTASRDFNKEAIFGIHAL* 300
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03595 299 SMART sant 123 173 IPR001005 -
Phac1g03595 299 SMART sant 23 75 IPR001005 -
Phac1g03595 299 Gene3D - 125 176 - -
Phac1g03595 299 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 22 243 IPR043363 -
Phac1g03595 299 FunFam Transcription factor SRM1 19 86 - -
Phac1g03595 299 CDD SANT 26 72 IPR001005 -
Phac1g03595 299 ProSiteProfiles Myb-like domain profile. 27 73 IPR001005 -
Phac1g03595 299 SUPERFAMILY Homeodomain-like 26 79 IPR009057 -
Phac1g03595 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 119 175 IPR017930 -
Phac1g03595 299 Pfam Myb-like DNA-binding domain 26 71 IPR001005 -
Phac1g03595 299 Pfam Myb-like DNA-binding domain 126 170 IPR001005 -
Phac1g03595 299 ProSiteProfiles SANT domain profile. 127 175 IPR017884 -
Phac1g03595 299 FunFam transcription factor MYB1R1 125 176 - -
Phac1g03595 299 ProSiteProfiles Myb-like domain profile. 119 171 IPR001005 -
Phac1g03595 299 NCBIfam myb-like DNA-binding domain, SHAQKYF class 122 174 IPR006447 GO:0003677
Phac1g03595 299 Gene3D - 19 86 - -
Phac1g03595 299 CDD SANT 126 170 IPR001005 -
Phac1g03595 299 SUPERFAMILY Homeodomain-like 121 175 IPR009057 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac1g03595 Phac-Chr1 41445111 41447920 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac1g03595 Myb_DNA-binding 7.3e-11 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03595 - - gmx:100783469 503.442