Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03535 ATGGCTGGGATTTGCTGTAGAGTTGTAGGAGAAGGTGACACCCCTACCCCTCTTGATTCCTCTCGCCCTTCCACCACCCGCAGAGCTATGGACATCGTTCCCTTCAACTACATGGCTGACATGACCGTGCCCGAGTCTTCTCGGAAGCGCCCCAAGCTCGATCTTAATGACACTGATGATCAACTTCAAAATGACCAGGAATCCTCCGGAGCCAAGGTTATGAAGAAGGATTCCCAATTCGTCAAGGAGGACGACGACGAAGACGTTTCCGACACTAAGTCGCTGTCGGACGATGACTCCTCCGAGGATGAAGAGTGTCCCAAGTATGGGGTCACCTCTGTCTGCGGCAGGAGGAGAGACATGGAGGATTCCGTTGCCCTGCGCCCTTTCTTCTCGCTTGATGGCTTTCACTACTTTGGCGTTTTTGACGGCCATGGTTGCTCTCATGTTGCCACCATGTGCAAGGAGCGGCTACATGAGATTGTGAACGAAGAGATTCTCGACGAGGACGATAATTTTGAGTGGAAATTGTTGATGCAGAGCGGTTTCGCTCGCATGGACGAAGAGGTTTTCCGCCGGAGCCAGGGCAACCAGACTTTCAACTGCAGGTGCGAGCTCCAGACTCCGCACTGCGACGCTGTTGGATCCACTGCTGTCATCGCCGTTCTCACCCCGGACAAAATTGTCGTCTCCAACTGCGGTGATTCCCGTGCTGTCCTCTGCCGCAACGGAGTTGCCATCCCTCTCTCTTCTGATCACAAATGTTTCGATCCGTTTTCTATTGTTCAGCCTGATCGCCCCGACGAATTGCTCCGAGTGGAATCCAAGGGGGGGCGCGTGATTTACTGGGATGGCCCAAGAGTGCTGGGTGTGTTGGCCATGTCTCGAGCCATAGGAGACTACTACCTGAAACCGTTCGTGATTTCGGAGCCCGAGGTGACTGTGACAGAGCGAAGTGATGGAGACGAGTGTTTGATTCTGGCAAGTGATGGACTGTGGGATGTGGTGTCAAACGAAACTGCTTGTGGGGTGGTGAAGATGTGTCTCAAGTCCCAGAAGCCTCCGACTCCGCCGGGGTCTCCCGGCGGTTATGTGACGGCAGATGGATCCGACCGTGCTTGCTCGGATGCCTCAATTCTGTTGACAAAGTTGGCTTTGGCCAGGCACAGTGCTGATAATGTGAGCGTGGTGGTGATTGATCTGAGGAAGGAGCAAGGACAAACTTCGGTTGTTCCCACTTCCAACTACGTTAACGAATGA 1260 0.5373 MAGICCRVVGEGDTPTPLDSSRPSTTRRAMDIVPFNYMADMTVPESSRKRPKLDLNDTDDQLQNDQESSGAKVMKKDSQFVKEDDDEDVSDTKSLSDDDSSEDEECPKYGVTSVCGRRRDMEDSVALRPFFSLDGFHYFGVFDGHGCSHVATMCKERLHEIVNEEILDEDDNFEWKLLMQSGFARMDEEVFRRSQGNQTFNCRCELQTPHCDAVGSTAVIAVLTPDKIVVSNCGDSRAVLCRNGVAIPLSSDHKCFDPFSIVQPDRPDELLRVESKGGRVIYWDGPRVLGVLAMSRAIGDYYLKPFVISEPEVTVTERSDGDECLILASDGLWDVVSNETACGVVKMCLKSQKPPTPPGSPGGYVTADGSDRACSDASILLTKLALARHSADNVSVVVIDLRKEQGQTSVVPTSNYVNE* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03535 419 Pfam Protein phosphatase 2C 108 393 IPR001932 -
Phac1g03535 419 CDD PP2Cc 108 401 IPR001932 -
Phac1g03535 419 Gene3D - 103 410 IPR036457 -
Phac1g03535 419 FunFam Protein phosphatase 2C 50 112 409 - -
Phac1g03535 419 MobiDBLite consensus disorder prediction 45 59 - -
Phac1g03535 419 SMART PP2C_4 96 399 IPR001932 -
Phac1g03535 419 MobiDBLite consensus disorder prediction 1 108 - -
Phac1g03535 419 SUPERFAMILY PP2C-like 108 402 IPR036457 -
Phac1g03535 419 MobiDBLite consensus disorder prediction 70 89 - -
Phac1g03535 419 MobiDBLite consensus disorder prediction 90 104 - -
Phac1g03535 419 ProSiteProfiles PPM-type phosphatase domain profile. 108 401 IPR001932 -
Phac1g03535 419 PANTHER PROTEIN PHOSPHATASE 85 401 IPR015655 GO:0004722|GO:0006470
Phac1g03535 419 ProSitePatterns PPM-type phosphatase domain signature. 138 146 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03535 Phac-Chr1 41091584 41093181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03535 107 407 PP2C-type Phosphatase Gene Family AT1G07430 59.517 4.72e-134 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03535 K14497 - gmx:100776356 602.053