Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03517 ATGGAGGAGTCTCAGTACCTGTTGTGGTTCAAGAGAAAACAAATGTTGAACTCACATATTCAACAACCATTTGGAGCCCGCAACAACAACACCAACTCATCATGGGAGGAAAGGGCTTTTGCAGAAGATGCTGCTAGGATACTTGGTGGGTGCATATGGCCTCCAAGATCTTACTCCTGTAATTTCTGTAAAAGAGAGTTTAGGTCTGCTCAGGCTCTAGGGGGACACATGAATGTGCACAGGAGGGACAGGGCTAGGCTCAAACAAAGCCTTAGTCACCATAATGAATCCCTTCAAGATCTTCACAAAAATGATTGTCCAGTTGCAACAAGCAAAGTCTCGTCTTCTAGGCCCTCAACTATATCCACTCAAGAAAATTGTTATCATCAGCCTACCATGTCTCCTTACTCTTCTCCAATTAGCTGGGGACATCACCACATGGGGTCCCCTGATTCAGAACCAAAAGGGTCTGCAGTGAATGGAAGGGAACAGTTTTTAAAAGGTTTGGGTTGCAATGATTATGTTGAAACAAGTTTGTCTGTGGGACAAAGTTCAGTGTTTGTCCAAAAGTTACCAATTGAATCATATGGGGACGAAGCTATCAGTTATAAAAGATCAAAGACTTCTATGCCTCCTTTGCCTGTCTTCCACAAGCCATGTTCAAGTGATAGACACCTAACTTTTCATTCTGCAGAATTTGTACTCAAGCCTGGAATGGAAGACTTAGATCTTGAACTCAGGCTGGGGAAGCCGCAGAAAGTTATTTAG 768 0.4323 MEESQYLLWFKRKQMLNSHIQQPFGARNNNTNSSWEERAFAEDAARILGGCIWPPRSYSCNFCKREFRSAQALGGHMNVHRRDRARLKQSLSHHNESLQDLHKNDCPVATSKVSSSRPSTISTQENCYHQPTMSPYSSPISWGHHHMGSPDSEPKGSAVNGREQFLKGLGCNDYVETSLSVGQSSVFVQKLPIESYGDEAISYKRSKTSMPPLPVFHKPCSSDRHLTFHSAEFVLKPGMEDLDLELRLGKPQKVI* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03517 255 Pfam C2H2-type zinc finger 58 82 - -
Phac1g03517 255 Gene3D Classic Zinc Finger 55 128 - -
Phac1g03517 255 ProSiteProfiles Zinc finger C2H2 type domain profile. 58 85 IPR013087 -
Phac1g03517 255 ProSitePatterns Zinc finger C2H2 type domain signature. 60 80 IPR013087 -
Phac1g03517 255 SMART c2h2final6 58 80 IPR013087 -
Phac1g03517 255 MobiDBLite consensus disorder prediction 108 128 - -
Phac1g03517 255 SUPERFAMILY beta-beta-alpha zinc fingers 55 85 IPR036236 -
Phac1g03517 255 PANTHER OS07G0101800 PROTEIN 29 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03517 Phac-Chr1 40980934 40982075 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03517 27 127 C2H2 Transcription Factor Family AT2G37740 46.491 2.90e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac1g03517 zf-C2H2_6 2e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03517 - - gmx:102663477 434.106