Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03514 ATGGCCAATCGCTGGTGGGCTGGGAATGTGGGGATGATTAGAGAGCAAGAGTTGATGGAGAACAATAACAACGCGAATACTACTCCGACCAATAGCAGTAACAGCAACACCAACGCCAACACCAACACCACGGAGGAAGAGGTCAGCAGGGACAACGGGGACGACCAGAACCAGAACCTCGGAAGCCACGAAGGTTCGGAGCCCGGAAGCGGTGGTCGGAGGCCACGTGGCAGGCCTCCCGGGTCCAAGAACAAGCCCAAGCCGCCGATTGTCATAACCAAAGAAAGCCCCAACGCGCTCCGAAGCCACGTGTTGGAAATCGCCAGCGGCAGCGACGTCGCGGAGAGCATCGCCGCCTTCGCCAACCGCCGCCACCGAGGCGTGTCGGTCCTCAGCGGCAGCGGCATTGTCACCAACGTCACTCTCCGACAGCCCGCCGCGCCCGCCGGAGTCATCACCCTCCACGGAAGGTTCGAGATTCTCTCCCTCTCCGGCGCGTTTTTGCCCTCCCCTTCGCCTCCCGGCGCCACCGGACTCTCCGTCTACTTGGCCGGAGGGCAGGGGCAGGTTGTTGGCGGCACCGTTGCGGGTTCTTTGGTGGCCTCCGGGCCGGTGATGGTGATCGCCGCCACATTCGCCAATGCTACCTACGAGAGGCTGCCGCTGGAGGAAGAACAAGGTGAAGAGGAAATGCAAGTGCAACAACAACAGCAGCAGCAACAACAACAATCTCAGGGTTTGGGTGAACAAGTTTCAATGGCCATGTATAATTTGCCTCCTAATTTGCTACACAATGGTCAGAACATGCCTCATGATGTATATTGGGGAGCTGCTCCACCTCGTCCTCCACCCTCCTTCTGA 861 0.5923 MANRWWAGNVGMIREQELMENNNNANTTPTNSSNSNTNANTNTTEEEVSRDNGDDQNQNLGSHEGSEPGSGGRRPRGRPPGSKNKPKPPIVITKESPNALRSHVLEIASGSDVAESIAAFANRRHRGVSVLSGSGIVTNVTLRQPAAPAGVITLHGRFEILSLSGAFLPSPSPPGATGLSVYLAGGQGQVVGGTVAGSLVASGPVMVIAATFANATYERLPLEEEQGEEEMQVQQQQQQQQQQSQGLGEQVSMAMYNLPPNLLHNGQNMPHDVYWGAAPPRPPPSF* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03514 286 ProSiteProfiles PPC domain profile profile. 97 234 IPR005175 -
Phac1g03514 286 MobiDBLite consensus disorder prediction 224 250 - -
Phac1g03514 286 MobiDBLite consensus disorder prediction 22 46 - -
Phac1g03514 286 MobiDBLite consensus disorder prediction 22 94 - -
Phac1g03514 286 PIRSF ESCAROLA 11 285 IPR014476 GO:0003680
Phac1g03514 286 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 225 - -
Phac1g03514 286 Gene3D - 100 242 - -
Phac1g03514 286 FunFam AT-hook motif nuclear-localized protein 100 228 - -
Phac1g03514 286 CDD DUF296 101 212 IPR005175 -
Phac1g03514 286 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 35 277 IPR014476 GO:0003680
Phac1g03514 286 MobiDBLite consensus disorder prediction 231 250 - -
Phac1g03514 286 Pfam Plants and Prokaryotes Conserved (PCC) domain 101 213 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03514 Phac-Chr1 40959673 40963846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03514 1 286 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 55.696 1.46e-78 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03514 - - gmx:102667174 407.527