Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03464 ATGGCCAAAACCAGAACACTTGTGCTTGCGCTTCCTGTGTGTGTTTTGACCCTTCTTCTGGTCACAGACATTGCAAAGTCTCAAGAGTTTTTCTTCAACGGGTTTGGTGGTGCTTCTGCCACCAACATGGCCTTAAACGGAGGAGCGGTGATTGAGCACAAGGGCTTGCTTCGTTTAACAAACAACACTCAGAGAGTAATTGGGCACGCGTTTTATCCAACTCCAATTCAGTTCAAGCACAACAACAAAAGCTCTTCCACCGACACCAAACTTTTCTCCTTTTCCACTGCTTTTGCGTTTGCAATCATCCCTCAGTACCCAAAACTCGGTGGCCACGGTTTTGCCTTCACCATTTCGCGCTCCGCGTCCCTCGCGGACGCGTACCCGAGCCAGTACTTGGGCCTCCTCAACCCAAAAGAACTGGGGAATTTCTCAAACCACCTTTTCGCAGTGGAGTTCGATACCGTCCAAGACTTCGAGTTCGAGGACATCAATGACAACCATGTTGGTGTGAACCTCAACAACATGGTATCCAACAAATCCGTGGAAGCTGCGTTTTTCCCTGAGGACTCAGCCAATAAGCAAAACCTGAGTTTGAAGAGTGGTAAAGTGATACAAGCATGGGTTGATTATGATTCATCAAATAACGAATTGGAGGTTAGACTCTCCCCAACTTCCTCCAAACCCACTTACCCAATTTTAAAATACAAAGTAGATCTCTCACCAATTCTCCAAGATTCCATGTACGTGGGGTTCTCTTCTTCAACAGGGTTACTAGCAAGCACACACTATATTTTTGGTTGGAGCTTCAAAATAAACGGAGAGGCCAAAACCCTTTCCTTGCACAACCTCCCATCGCTCTCTGCCCCTAACAAAACTCAAAACCACTTAATCTTAGGACTCTCCCTTTCATTCATTCTAACACTCGCCACAATTTCTCTGGCGTGTTACCTATTCAGAAGGATGAAGAACTCCGAAGTAATCGAAGCTTGGGAGAGGGATGTTGTTGGGCCGCACAGATTCCCATACAAAGAGTTGCACAAAGCCACGAACTGTTTCAAAGACAAGAACCTCCTCGGGTTTGGAGGGTCCGGTCGCGTCTACAAAGGGGTTCTCCCGAAGACCCACATGGAAATCGCGGTGAAGCGAATCTCCCACGAATCTAAACAACGTGTGCAGGAGTTTGTGTCTGAAGTATCAACCATAGGAAGACTCCGACACAGGAACCTCGTACAGTTACTGGGTTGGTGTCGGAAACAAAACGACCTTCTACTTGTGTACGATTTCATGAAAAATGGAAGCTTGGACAGATACTTGTTCGATGAACCGAGGAAAGTACTAACATGGGAGGAAAGGTTTAAGATAATAAAAGGGGTGGGTTTGGGGTTGGTGTATTTGCATGAGGAGTGGGAACAGACGGTGATTCACAGAGACGTCAAAGCTGGGAACGTTTTGTTGGATAACGAGATGAATGGGAGGTTGGGGGATTTTGGGTTGGCCAAGCTTTATGAGCATGGTGCCAACCCTAGCACCACACGTGTGGTGGGAACGATGGGGTACCTTGCACCTGAACTCACACGAACGGGGAAACCCACCACCAGTTCTGATGTTTACGCCTTCGGAGCGTTGTTGTTGGAGGTGGTGTGTGGGAGAAGACCCATCGACGTGAAGGCGTTGCCGGAGGAGCTGGTGCTGGTGGACTGGGTCTGGGAGCGGTGGCGCATGGGGGCGCCGCTGGCGGTGGTGGACTCAAGGTTGGGTAGTGCGTTTGATGAGGTGGAAGTTTTGCTGGTGATCAAAGTGGGGTTGTTGTGTTCCGCGGAGGCACCGGAGAAGAGGCCCAGCATGAGGCAGGTGGTGAGGTACTTGGAGAGGGAGGTGGCGCCGCCGCCGGTGGTGGTGGATGGTGGTGGTGGCTGCTATGGAGAGTTGCATTCATATTCGCCGTGGTCGTCGGTGGGTGATGACGTGGCGTCGTCGCTTTCACTTTCCGGTGGCCGGTAA 2004 0.5015 MAKTRTLVLALPVCVLTLLLVTDIAKSQEFFFNGFGGASATNMALNGGAVIEHKGLLRLTNNTQRVIGHAFYPTPIQFKHNNKSSSTDTKLFSFSTAFAFAIIPQYPKLGGHGFAFTISRSASLADAYPSQYLGLLNPKELGNFSNHLFAVEFDTVQDFEFEDINDNHVGVNLNNMVSNKSVEAAFFPEDSANKQNLSLKSGKVIQAWVDYDSSNNELEVRLSPTSSKPTYPILKYKVDLSPILQDSMYVGFSSSTGLLASTHYIFGWSFKINGEAKTLSLHNLPSLSAPNKTQNHLILGLSLSFILTLATISLACYLFRRMKNSEVIEAWERDVVGPHRFPYKELHKATNCFKDKNLLGFGGSGRVYKGVLPKTHMEIAVKRISHESKQRVQEFVSEVSTIGRLRHRNLVQLLGWCRKQNDLLLVYDFMKNGSLDRYLFDEPRKVLTWEERFKIIKGVGLGLVYLHEEWEQTVIHRDVKAGNVLLDNEMNGRLGDFGLAKLYEHGANPSTTRVVGTMGYLAPELTRTGKPTTSSDVYAFGALLLEVVCGRRPIDVKALPEELVLVDWVWERWRMGAPLAVVDSRLGSAFDEVEVLLVIKVGLLCSAEAPEKRPSMRQVVRYLEREVAPPPVVVDGGGGCYGELHSYSPWSSVGDDVASSLSLSGGR* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03464 667 Gene3D - 26 287 - -
Phac1g03464 667 CDD lectin_legume_LecRK_Arcelin_ConA 29 274 IPR001220 GO:0030246
Phac1g03464 667 Gene3D Phosphorylase Kinase; domain 1 338 429 - -
Phac1g03464 667 FunFam L-type lectin-domain containing receptor kinase S.4 430 635 - -
Phac1g03464 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 288 IPR013320 -
Phac1g03464 667 SMART serkin_6 353 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g03464 667 SUPERFAMILY Protein kinase-like (PK-like) 336 630 IPR011009 -
Phac1g03464 667 FunFam L-type lectin-domain containing receptor kinase S.4 26 278 - -
Phac1g03464 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Phac1g03464 667 FunFam serine/threonine-protein kinase PBS1-like 320 429 - -
Phac1g03464 667 Pfam Protein kinase domain 353 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g03464 667 Gene3D Transferase(Phosphotransferase) domain 1 430 632 - -
Phac1g03464 667 CDD STKc_IRAK 359 625 - -
Phac1g03464 667 Pfam Legume lectin domain 28 283 IPR001220 GO:0030246
Phac1g03464 667 ProSitePatterns Protein kinases ATP-binding region signature. 359 382 IPR017441 GO:0005524
Phac1g03464 667 PANTHER - 47 627 - -
Phac1g03464 667 ProSiteProfiles Protein kinase domain profile. 353 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03464 Phac-Chr1 40938205 40940601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03464 28 633 Receptor kinase-like Gene Family AT3G55550 61.501 0.0 742
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phac1g03464 Pkinase 5.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03464 - - gmx:100787552 1022.31