Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03444 ATGGCTATCAGCCAAAGTATACTATGCTTCATCACTTTCACTTGTTTCATGCACATAACGAAACCTTCAAACTTGAACACAGATGAGTTACTACAGGGTCATGAGTTCACAACAAGTGACCGTTTGATTTCACCTACAGGTTTGTATATAATGAGTTTCTTTCAGAATAAAGGCTCTGAAGATTTCTACCTTGGAATTAGAAAATCAGGTGAAAACTCAACTAATCAGAATTTCTGGATTGCTAATAGAGACATGCCAATCCACGACCCTGCAACGTTTCTCATAATTGATGAATTTGGTAACTTGAAAATTATTTCCAACCGGGAAAGAAATTCCAGTATCATGCTCTATTCTTCTGAAGTTGGAAGAGAAGTTAACAGCAATACTACCTTCAACGCCATATTGCAAGATACTGGCAACCTTATGTTTCGTGAAATGAACCAAAATGGATCTTTGAAGAGGATATTATGGCAAAGCTTTGATCATCTCTCACACGTTCTTATGATGGGGATGAGACTAGGGTTTAACAGAAAAACAGGTCAAAATTGGACTATAACATCACGGAGAAGTGAAAAGACTCTTTTGTCAGGGTCTTTCACCCTTGGCCTTGAGCCCAAAACGAAGCAATTGATGATATGGTGGCGGGGTAACATTTTTTGGAGTAGTGGGCAATGGAGCAATGGAAGCTTTGCCAATCTAAAGTCTCCATTTTATGAGAAGGACTTCAAATTCGATTACTGCTCAGATGAAAATGAAACCTATGCGTCATATCTTCCTAGTTATATCTACTTAGAGCCTTCAGGTTCAATATATGGCGGCATATCTGGTGCTTCTTACTCATGCGTCAATGACTACTTTCTATCTGGTTGTTCAATGCCAAGTGTTCCCAAATGTAGAGATCGTGAAAGTTTGTACCGGGGTAGCAGGAATAGCTATGGAGTAATGTCAGGGACAGGTTTCAAATTTGATGAAAGTGAGAACCTGACAAGTTTTGATTGCTGGATGAAGTGCTTGAACAATTGCAGTTGTGAGGCCTACTCTTACGTTAACGAGGATGAAACTGGGTGTGAGATATGGAGCAGAGACTCAGCAAACTTTGTGGCCACTACTAATTTGACTGCTGGAGGGCGTCAGATATACTTCCTTGTTGGTAGAAAAAAAGGCAACACTAAGATATGGATCATAAGCACAATAGTTGGAACTCTCACCCTATTCATCTTATGCTTCACATGCAATAAGTTGTGGAAAAAACTAAAACTAAAAGCCGAAGATCGCAAGAAGCGAACAAAATTATTGTGTGAAATCGGAGGAAATACTGCAATTTCCATTGCTTACAATGAAAGAAACGAACAAAAGAAAAATGGAAAGACCAGTGATGATATGTATATTTTCAATTTGCAAACTATTCTTGAGGCAACTGCTAATTTTTCTTCCACAAATAAGATAGGAGAAGGTGGTTTTGGACCTGTCTACAAGGGAAAGTTACCAAGTGGACAAGAAGTAGCCATAAAGAGACTTTCCAAAAGCTCGGGACAAGGGTTGATAGAGTTTAAAAATGAAGCGATGCTAATTGTCAAACTCCAACACACCAACTTAGTGAGGCTGCTTGGTTTTTGTATTGACAAAGAAGAAAGGATATTAGTTTATGAGTACCTCCCCAACAAAAGTTTGAATTTGTACCTCTTTGATTCCAATCAAGACACTACAATAGAATGGAACACACGATGCAAAATTATTGAAGGAGTTGCACAAGGACTTGTATATTTACACCAATATTCAAGATTAAAAGTGGTACATAGGGACTTGAAAGCCAGCAACATTTTATTAGACAATCAATTAAATCCAAAAATATCTGATTTCGGTACGGCTAGAATATTTGGATTGACAGAATCTGAAGAACGAACTAATAGAATTGTTGGAACATTTGGTTATATGTCTCCAGAATATGCTATGATGGGTGTTATCTCAACTAAATTAGACGTGTATAGCTTTGGCATCCTTTTGTTAGAGATTTTAAGTGGAAAGAAGAATAGTACTGATTATCCATTTAATCTTGTTTTTAATGCATGGAAATTATGGAATGAAGGTGAAGCTCTAAATCTAATGGACTCAAACATGAATGGATCATACTCCCCCACCCAAGTGTTAAGATACATTCATATTGGTCTCTTGTGCACACAAGATCAAGCAAGAGACAGACCCACTATGCTTGAGGTTGTTTCTTTTCTTTCAAATGAAATTACACATTTACCTCAACCTACACAACCAGGATTTTGTGTCACTGGAGGAGTGGAAAATAGAGATGTGCACTACACTTGTTCCATAAAGGAGACAACAAATTCATTGACTTCAGTTTCTACAAAAATGGTTCTCACTTTGAGCAAGAGAGTGCTATGCTTCATCGTCACTTGTACCTGTCTCTTGCAGCTTGCAAAGCCTTCAAACTTGAGGGAAGACACGTTGGTCCAAGGCCATCCCCTTGCAGCAACGAACCGTTTGATTTCGCCTTCAGGTTTATACACACTGCGTTTCTTTCAGCTTGATGGTGGCTCTGAAGCTAACACCAAATTCTACCTTGGCATATCAGCCAATAACTTCTCTTACTATGTTTGGCTTGCCAACAGGGACAATCCAATCCATGATGACCCTGGAGTTCTTACAATTGATGAATATGGCAACCTTAAAATTGTGTCAAGTTCTACCACTATGATACTATATTCAGTTGAAGCAGAAAGTAACAAAAGTGTTAGAGCCTCTTTGCTAGATACAGGAAACTTTGTGCTTCATGAATTGAACTCAGATGGATCTGTGAAGAGGGTGTTATGGCAGAGCTTTGATTACCCAACAGACACAATTTTACCAGGGATGAAGCTTGGGTATGACAAGCACAGTGGCCACAGGTGGTCTCTAACAGCAAGGAGAAGTTACAGAACTCTTTGGTCAGGGTCTTTCTCCTTCAGCCTTGACCCCAAAACTAACCAATTGGTTACTAGATGGAGAGGGGCCATTATTTGGAGCAGTGGAGAGTGGAGAAATGGAAGTTTTTGCAATCTGAATTCTTCATCACTTGAGAGAGAGAACTTCAATTTCACTTTCTTTTCAAATGAAAGTTTGACATACGTTGAATATGCTTCAGTTTCTGGTTTTCTCATCATGGGACCATTGGGTATAATCAATGCTAGTGGTGTCCCTTACTCATGTACTGATAGTGAGATTGTGCCTGGTTGTACAATGCCACAGCCTCCCAAATGTAGGAAAGATAGTGATTTGTACTTGCCAAGTTGGAATAGCTTTGGAGCAATGTCAAGGAAAGGATACATCTTTGATGAAACAGAGAACTTGACCATTTCTGATTGCTGGATGAGGTGCTTGAAAAATTGCTCCTGTGAGGCTTACACTTATGCATTCAAGGATGCAACTGGCTGTGAAATATGGAGCAGACACACATCAGACTTTCTTGAGAGTAATTCCGGTGTTGGTCGTCCAATTTTCTTCTTTCTCACCCAAACCAAAACCAAAGGCAAGAAGAGGAGAATATGGATTGAAGGTGCTGCAGTTGGAGTTCTTCTTCTGATAGTCTCATTCATTGCATCCTTTATCATATTGTGGAGAAAACAAAAAGAAAGAGTTGAAAAGCGTAAGAAGCGAGCAAATATATTCTCTGACATTGGAGAAAATACTGAAATTTCTGATGCATGCGATGAGGGAAGAGAACAATGGAATGAGAAGACAGGCAATGATACACATAAATTCGAGTTTATAACCATTCTTGAGGCAACAGACAATTTCTCTTTCACTAATAAGATCGGAGAGGGTGGCTTTGGACCTGTTTACAAGGTAATAAATTTTTATTAA 3855 0.3891 MAISQSILCFITFTCFMHITKPSNLNTDELLQGHEFTTSDRLISPTGLYIMSFFQNKGSEDFYLGIRKSGENSTNQNFWIANRDMPIHDPATFLIIDEFGNLKIISNRERNSSIMLYSSEVGREVNSNTTFNAILQDTGNLMFREMNQNGSLKRILWQSFDHLSHVLMMGMRLGFNRKTGQNWTITSRRSEKTLLSGSFTLGLEPKTKQLMIWWRGNIFWSSGQWSNGSFANLKSPFYEKDFKFDYCSDENETYASYLPSYIYLEPSGSIYGGISGASYSCVNDYFLSGCSMPSVPKCRDRESLYRGSRNSYGVMSGTGFKFDESENLTSFDCWMKCLNNCSCEAYSYVNEDETGCEIWSRDSANFVATTNLTAGGRQIYFLVGRKKGNTKIWIISTIVGTLTLFILCFTCNKLWKKLKLKAEDRKKRTKLLCEIGGNTAISIAYNERNEQKKNGKTSDDMYIFNLQTILEATANFSSTNKIGEGGFGPVYKGKLPSGQEVAIKRLSKSSGQGLIEFKNEAMLIVKLQHTNLVRLLGFCIDKEERILVYEYLPNKSLNLYLFDSNQDTTIEWNTRCKIIEGVAQGLVYLHQYSRLKVVHRDLKASNILLDNQLNPKISDFGTARIFGLTESEERTNRIVGTFGYMSPEYAMMGVISTKLDVYSFGILLLEILSGKKNSTDYPFNLVFNAWKLWNEGEALNLMDSNMNGSYSPTQVLRYIHIGLLCTQDQARDRPTMLEVVSFLSNEITHLPQPTQPGFCVTGGVENRDVHYTCSIKETTNSLTSVSTKMVLTLSKRVLCFIVTCTCLLQLAKPSNLREDTLVQGHPLAATNRLISPSGLYTLRFFQLDGGSEANTKFYLGISANNFSYYVWLANRDNPIHDDPGVLTIDEYGNLKIVSSSTTMILYSVEAESNKSVRASLLDTGNFVLHELNSDGSVKRVLWQSFDYPTDTILPGMKLGYDKHSGHRWSLTARRSYRTLWSGSFSFSLDPKTNQLVTRWRGAIIWSSGEWRNGSFCNLNSSSLERENFNFTFFSNESLTYVEYASVSGFLIMGPLGIINASGVPYSCTDSEIVPGCTMPQPPKCRKDSDLYLPSWNSFGAMSRKGYIFDETENLTISDCWMRCLKNCSCEAYTYAFKDATGCEIWSRHTSDFLESNSGVGRPIFFFLTQTKTKGKKRRIWIEGAAVGVLLLIVSFIASFIILWRKQKERVEKRKKRANIFSDIGENTEISDACDEGREQWNEKTGNDTHKFEFITILEATDNFSFTNKIGEGGFGPVYKVINFY* 1285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03444 1284 SUPERFAMILY Protein kinase-like (PK-like) 1247 1282 IPR011009 -
Phac1g03444 1284 CDD B_lectin 826 948 IPR001480 -
Phac1g03444 1284 Gene3D Transferase(Phosphotransferase) domain 1 552 752 - -
Phac1g03444 1284 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 552 751 - -
Phac1g03444 1284 SMART blect_4 824 948 IPR001480 -
Phac1g03444 1284 SMART blect_4 33 163 IPR001480 -
Phac1g03444 1284 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Phac1g03444 1284 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 921 1279 - -
Phac1g03444 1284 CDD STKc_IRAK 482 743 - -
Phac1g03444 1284 Pfam D-mannose binding lectin 869 974 IPR001480 -
Phac1g03444 1284 Pfam D-mannose binding lectin 78 189 IPR001480 -
Phac1g03444 1284 ProSiteProfiles Bulb-type lectin domain profile. 818 941 IPR001480 -
Phac1g03444 1284 SUPERFAMILY Protein kinase-like (PK-like) 459 760 IPR011009 -
Phac1g03444 1284 Pfam PAN-like domain 1112 1148 IPR003609 -
Phac1g03444 1284 Pfam PAN-like domain 326 362 IPR003609 -
Phac1g03444 1284 ProSiteProfiles Protein kinase domain profile. 476 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g03444 1284 ProSiteProfiles PAN/Apple domain profile. 298 385 IPR003609 -
Phac1g03444 1284 ProSiteProfiles PAN/Apple domain profile. 1084 1157 IPR003609 -
Phac1g03444 1284 SMART serkin_6 476 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g03444 1284 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 441 551 - -
Phac1g03444 1284 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 226 IPR036426 -
Phac1g03444 1284 SMART ntp_6 1093 1169 IPR003609 -
Phac1g03444 1284 SMART ntp_6 307 384 IPR003609 -
Phac1g03444 1284 Gene3D Phosphorylase Kinase; domain 1 1226 1282 - -
Phac1g03444 1284 Gene3D Phosphorylase Kinase; domain 1 438 551 - -
Phac1g03444 1284 Pfam Protein kinase domain 477 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g03444 1284 ProSiteProfiles Bulb-type lectin domain profile. 27 156 IPR001480 -
Phac1g03444 1284 Gene3D - 814 945 IPR036426 -
Phac1g03444 1284 Gene3D - 23 161 IPR036426 -
Phac1g03444 1284 SUPERFAMILY alpha-D-mannose-specific plant lectins 868 1011 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03444 Phac-Chr1 40789497 40797747 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03444 444 772 Receptor kinase-like Gene Family AT4G11530 54.328 1.02e-113 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac1g03444 Pkinase 2.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03444 - - pvu:PHAVU_001G233000g 1454.11