Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03427 ATGGGTTGCTGCTTTAGTGCTCCTCTAAAGATCAAAGCCGAGAGTCCTCCACGTAATGGTTTGAATTCAAACGATGGTAGTAAAGAAGAGAATGATCCGAGTGGTTTAAGCGGCAAGGTGTCCTCTTCATCTATGCTTCTAACTCCTCAGAGTGAGGATGAGATATTAGAAGCCACCAATTTGAAGAATTTTGCATTCAATGAACTAAGAACTGCTACAAGGAACTTTCGTCCAGATAGTAGGGTAGGTGAAGGTGGGTTTGGTAGTGTGTTTAAAGGATGGATTGATGAGCACACGCTTGCCCCTACTAAAGCAGGGACAGGAATGGTCATTGCTGTGAAGAGGCTTAACCAAGAAAGCAACCAGGGACACACTGAATGGTTGACAGAAATCAACTACCTGGGGCAGCTGAGTCATCCTAATCTTGTGAAGCTAATTGGTTACTCCTTGGAGGATGATCACCGGATTTTGGTGTATGAATTTGTGGCCAAGGGTAGCTTGGATAATCACTTGTTTAGGAGGGCTTCTTACATTCAACCACTCTCTTGGAACATCCGTATGAAGATTGCTCTTGATGCTGCTAAGGGCCTTGCATTTCTTCACAGTGATGAAGTAGATGTAATATTTAGGGACTTCAAAACTTCTAATATCTTACTTGATTCTAACTATAATGCAAAACTCTCTGATTTTGGGTTGGCAAAAAATGGACCACAAGGTGACAAGAGTCATGTTTCTACAAGGGTGATGGGCACCTTTGGCTACGCTGCTCCTGAGTATATTGCCACAGGGCACCTAACCAAAAGGAGTGACATATACAGTTTTGGAGTTGTTCTTCTCGAACTTATGTCAGGAAAACGTGCACTGGACGACAACAGGCCAAGTGGGGAGCATAATTTAGTTGAATGGGCCAAACCACTTCTCATAAACAAACACAAGATTTCTCAAGTCATGGATGCACGTATAGAAGGCCAATACTCTAAGCGAGAAGCCAAGAGAATAGCTCACCTTGCAATTCAATGCCTATCTACAGAACCAAAAGTTAGACCAAACATAGAAGATGTGGTGAGATCATTGGAACATCTTCAGGATTCCAATCACACACAAATAAATGGTCATAGCTCTACCACCAATTCTACTCCTGTTTCTAGTTTGTCTCCTTCTCCTCTTCGTACATAG 1176 0.426 MGCCFSAPLKIKAESPPRNGLNSNDGSKEENDPSGLSGKVSSSSMLLTPQSEDEILEATNLKNFAFNELRTATRNFRPDSRVGEGGFGSVFKGWIDEHTLAPTKAGTGMVIAVKRLNQESNQGHTEWLTEINYLGQLSHPNLVKLIGYSLEDDHRILVYEFVAKGSLDNHLFRRASYIQPLSWNIRMKIALDAAKGLAFLHSDEVDVIFRDFKTSNILLDSNYNAKLSDFGLAKNGPQGDKSHVSTRVMGTFGYAAPEYIATGHLTKRSDIYSFGVVLLELMSGKRALDDNRPSGEHNLVEWAKPLLINKHKISQVMDARIEGQYSKREAKRIAHLAIQCLSTEPKVRPNIEDVVRSLEHLQDSNHTQINGHSSTTNSTPVSSLSPSPLRT* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03427 391 MobiDBLite consensus disorder prediction 17 44 - -
Phac1g03427 391 ProSiteProfiles Protein kinase domain profile. 76 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g03427 391 FunFam Probable serine/threonine-protein kinase PBL8 162 378 - -
Phac1g03427 391 PANTHER OS01G0588500 PROTEIN-RELATED 42 362 - -
Phac1g03427 391 Gene3D Phosphorylase Kinase; domain 1 50 161 - -
Phac1g03427 391 FunFam Serine/threonine-protein kinase BIK1 42 161 - -
Phac1g03427 391 Pfam Protein tyrosine and serine/threonine kinase 80 358 IPR001245 GO:0004672|GO:0006468
Phac1g03427 391 Gene3D Transferase(Phosphotransferase) domain 1 162 382 - -
Phac1g03427 391 CDD STKc_IRAK 82 361 - -
Phac1g03427 391 MobiDBLite consensus disorder prediction 10 44 - -
Phac1g03427 391 SUPERFAMILY Protein kinase-like (PK-like) 61 365 IPR011009 -
Phac1g03427 391 MobiDBLite consensus disorder prediction 362 391 - -
Phac1g03427 391 ProSitePatterns Protein kinases ATP-binding region signature. 82 114 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03427 Phac-Chr1 40712539 40716788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03427 50 361 Glycoside Hydrolase AT3G07070 47.950 2.44e-100 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac1g03427 PK_Tyr_Ser-Thr 5.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03427 - - var:108326804 701.434