Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03416 ATGGAGAGTCCCCATTCCCTCTCTCCCTCATCTTCCTCCTCTTATTCCTCCGACGGTGTCACTTTCGACACGGAGGAGCCACGGACGCCGCTCGCCGTACGCCGCGCGTTGCACCTCATCAACTCCGGCGAGCCCCATCTCTGCCTCCAAGCCGCTCGTGACATCCGCCGACTCACCAAGACGTCCCAGCGCTGTCGACGCCAACTGTCTCAGGCTGTCGGTCCACTCGTTTCTATGCTCCGAGTCGACTCGCCCGAGTCACACGAATCCGCTCTTCTCGCCTTGCTCAACCTCGCCGTCAAAGACGAAAAGAACAAAATCAGTATTGTGGAGGCTGGTGCATTAGAACCGATAGTTAGTTTCCTCAAGTCTCAAAATCTAAATCTGCAGGAGTCTGCAACTGCATCATTGCTCACACTATCTGCCTCTTCTACCAACAAACCAATTATCAGTGCTTGTGGTGCCATTCCTCTTCTTGTAGAGATCCTTAGAGACGGAAGCCCCCAAGCTAAAGCTGATGCAGTAATGGCTCTCTCTAATTTATCAACACACCCTACTAATCTCAGAACCATTCTTGAGACAAACCCAATCCCTTCCGTGGTTGATCTTCTTAAAAAATGTAAAAAGTCCTCAAAAACAGCTGAAAAATGCTGCGCTTTGATAGAATCCTTGGTGGACTATGATGAGGGCAGAACTGCCTTGACATCTGAGGAAGGCGGGGTTCTGGCAGTTGTGGAAGTTCTTGAAAGTGGCACTCTCCAAAGTAGGGAGCATGCTGTTGGAGCACTGTTGACAATGTGCCAAAGCGATCGATGTAAATACCGGGAACCAATTCTAAGAGAAGGTGTCATTCCAGGACTTCTTGAGCTTACTGTTCAAGGGACACCCAAGTCTCAGTCAAAAGCACGCACCCTTTTGCAGTTACTGCGAGAGTCTCCTTATCCGAGATCTGAAATTCAACCTGACACTCTGGAGAATATAGTATGCAACATCATATCACAGATTGATGGGGATGATCAATCTGGTAAAGCAAAGAAGATGCTGGCTGAGATGGTTCAAGTAAGCATGGAACAAAGTCTGAGGCATTTACAACAAAGGGCTCTCGTGTGCACCCCAAGTGATCTTCCTATAGCTGGCTGTGCTTCTGAGGTTTCTTCAAAATGA 1164 0.488 MESPHSLSPSSSSSYSSDGVTFDTEEPRTPLAVRRALHLINSGEPHLCLQAARDIRRLTKTSQRCRRQLSQAVGPLVSMLRVDSPESHESALLALLNLAVKDEKNKISIVEAGALEPIVSFLKSQNLNLQESATASLLTLSASSTNKPIISACGAIPLLVEILRDGSPQAKADAVMALSNLSTHPTNLRTILETNPIPSVVDLLKKCKKSSKTAEKCCALIESLVDYDEGRTALTSEEGGVLAVVEVLESGTLQSREHAVGALLTMCQSDRCKYREPILREGVIPGLLELTVQGTPKSQSKARTLLQLLRESPYPRSEIQPDTLENIVCNIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSDLPIAGCASEVSSK* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03416 387 SUPERFAMILY ARM repeat 35 337 IPR016024 -
Phac1g03416 387 SMART arm_5 184 226 IPR000225 GO:0005515
Phac1g03416 387 SMART arm_5 143 183 IPR000225 GO:0005515
Phac1g03416 387 SMART arm_5 102 142 IPR000225 GO:0005515
Phac1g03416 387 SMART arm_5 61 100 IPR000225 GO:0005515
Phac1g03416 387 SMART arm_5 228 268 IPR000225 GO:0005515
Phac1g03416 387 MobiDBLite consensus disorder prediction 1 27 - -
Phac1g03416 387 FunFam U-box domain-containing protein 4 17 369 - -
Phac1g03416 387 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 113 155 IPR000225 GO:0005515
Phac1g03416 387 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 71 113 IPR000225 GO:0005515
Phac1g03416 387 MobiDBLite consensus disorder prediction 1 23 - -
Phac1g03416 387 Pfam Armadillo/beta-catenin-like repeat 146 182 IPR000225 GO:0005515
Phac1g03416 387 Pfam Armadillo/beta-catenin-like repeat 103 140 IPR000225 GO:0005515
Phac1g03416 387 Gene3D - 20 370 IPR011989 -
Phac1g03416 387 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 154 196 IPR000225 GO:0005515
Phac1g03416 387 PANTHER U BOX DOMAIN-CONTAINING 32 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03416 Phac-Chr1 40657251 40661577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03416 50 310 U-box Gene Family AT2G23140 34.601 2.73e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03416 - - gmx:100809684 640.573