Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03414 ATGGCACTGGCCAAAGACCAAAAAATTCCACATAATTCAACCATGAGCACCAAGGTTCCAAACTGTGTTTTCAGTGAGACTGTGGAGACTACCTCCGTCACTGTTCATAGAGTCAATGAGTACCACAAATCGGTTTTAGAAGAGGAAGATGGCTCCCAAACTACGCATGGTCTCAGCAATGATTCAGGTATAACGCATTGTGACAAAGGGTATACTTATAAGGATACAGATTACCAGCTTGATGAAGAAGAATCGCTGATAAATTTCAAAGGGTACAGTAATCTCATGCAAGCTGGTGAATCTTTGCTTAGCTTTCAGCACAACAGGTTGGTCCCTAACAACTGTTATTTGAAAGATAATATTCAGAAAGAGTACTCTGTTTGGGAGAATAATTTGCATCAAAGCCATAACCATTGGAATCAGACTAGTCCAAGAAGCACTAAAGACATGCGCCTAGTGCAGCATTTCAATTGCTTTCAAACTGCTAGTGGCTATAGCTCCATAGTCGATAATGCAAAAGAGAATCAACATGGAGAAGGTTCATCAGGGTGGCTCTACTCAGCACCAATTATCCCTAATCATAGGAGCCTCCACGAGTTAGGAGCACGAGAGGTTGTGTTGCAAAAGCGCCCTTCAATGGGAGAGAGCATGAAAGCTGCCAAGAAGCAATGCTCAAGTGGGAGCAAAACGCCAAAACATAAGTCAAGCCCATCCAAGGATCCTCAAAGTGTGGCCGCCAAGAATCGAAGAGAGAGGATAAGCGAACGATTGAAGATACTACAAGAACTAGTGCCCAACGGCTCCAAGGTTGCTATGGTTACTATGCTGGAGAAAGCAATTAGCTATGTAAAGTTTCTTCAACTTCAAGTGAAAGTGTTGGCAACTGATGAATTTTGGCCTGCGCAAGGTGGAAAACCTCCTGATATTTCTCAAGTAAAGGAAGTCATCGATGTCATTCGTTCATCACAAAGAGAGAAAAGTTTAAACTAA 990 0.4242 MALAKDQKIPHNSTMSTKVPNCVFSETVETTSVTVHRVNEYHKSVLEEEDGSQTTHGLSNDSGITHCDKGYTYKDTDYQLDEEESLINFKGYSNLMQAGESLLSFQHNRLVPNNCYLKDNIQKEYSVWENNLHQSHNHWNQTSPRSTKDMRLVQHFNCFQTASGYSSIVDNAKENQHGEGSSGWLYSAPIIPNHRSLHELGAREVVLQKRPSMGESMKAAKKQCSSGSKTPKHKSSPSKDPQSVAAKNRRERISERLKILQELVPNGSKVAMVTMLEKAISYVKFLQLQVKVLATDEFWPAQGGKPPDISQVKEVIDVIRSSQREKSLN* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03414 329 MobiDBLite consensus disorder prediction 211 250 - -
Phac1g03414 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 236 297 IPR036638 GO:0046983
Phac1g03414 329 SMART finulus 243 292 IPR011598 GO:0046983
Phac1g03414 329 Pfam Helix-loop-helix DNA-binding domain 247 287 IPR011598 GO:0046983
Phac1g03414 329 MobiDBLite consensus disorder prediction 219 243 - -
Phac1g03414 329 Gene3D - 232 294 IPR036638 GO:0046983
Phac1g03414 329 FunFam Transcription factor bHLH83 235 294 - -
Phac1g03414 329 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 108 295 IPR045843 GO:0003700|GO:0006355
Phac1g03414 329 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 237 286 IPR011598 GO:0046983
Phac1g03414 329 CDD bHLH_AtIND_like 238 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03414 Phac-Chr1 40644542 40646839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03414 68 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 43.494 1.48e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac1g03414 HLH 4.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03414 - - gmx:100810010 513.842